Information for 3-GTACTTWAAG (Motif 22)

C T A G A C G T G T C A G T A C A C G T A G C T G C A T G T C A C G T A A C T G
Reverse Opposite:
T G A C G C A T C A G T C G T A T C G A C G T A A C T G C A G T G T C A G A T C
p-value:1e-10
log p-value:-2.330e+01
Information Content per bp:1.729
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.98%
Number of Background Sequences with motif470.8
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets55.0 +/- 26.6bp
Average Position of motif in Background49.2 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.80
Offset:-6
Orientation:forward strand
Alignment:------GTACTTWAAG-
TACTAAGTACTTAAATG
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T G T C A G T A C A C G T A G C T G C A T G T C A C G T A A C T G A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

PH0116.1_Nkx2-9/Jaspar

Match Rank:2
Score:0.78
Offset:-6
Orientation:forward strand
Alignment:------GTACTTWAAG-
TTTTAAGTACTTAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T G T C A G T A C A C G T A G C T G C A T G T C A C G T A A C T G A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PH0112.1_Nkx2-3/Jaspar

Match Rank:3
Score:0.75
Offset:-6
Orientation:reverse strand
Alignment:------GTACTTWAAG
CNTTAAGTACTTAANG
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T G T C A G T A C A C G T A G C T G C A T G T C A C G T A A C T G
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------GTACTTWAAG-
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T G T C A G T A C A C G T A G C T G C A T G T C A C G T A A C T G A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GTACTTWAAG
AAGCACTTAA--
 A C G T A C G T C T A G A C G T G T C A G T A C A C G T A G C T G C A T G T C A C G T A A C T G
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTACTTWAAG
CCACTTGAA-
 C T A G A C G T G T C A G T A C A C G T A G C T G C A T G T C A C G T A A C T G
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTACTTWAAG
GCACTTAA--
 C T A G A C G T G T C A G T A C A C G T A G C T G C A T G T C A C G T A A C T G
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTACTTWAAG
RSCACTYRAG-
 A C G T C T A G A C G T G T C A G T A C A C G T A G C T G C A T G T C A C G T A A C T G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTACTTWAAG
ACCACTTAA--
 A C G T C T A G A C G T G T C A G T A C A C G T A G C T G C A T G T C A C G T A A C T G
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTACTTWAAG
MRSCACTYAA--
 A C G T A C G T C T A G A C G T G T C A G T A C A C G T A G C T G C A T G T C A C G T A A C T G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T