Information for 2-AATSTCAYTCTAGKSC (Motif 2)

G T C A C G T A A C G T A T G C A G C T A G T C G T C A A G T C A G C T A G T C A C G T C G T A A C T G A C T G A T G C G A T C
Reverse Opposite:
C T A G T A C G G T A C G T A C C G A T C G T A A C T G C T G A C T A G C A G T C T A G C T G A T A C G G T C A A C G T A C G T
p-value:1e-13
log p-value:-3.146e+01
Information Content per bp:1.695
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 25.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AATSTCAYTCTAGKSC-
NNGAGGTTACTNNAGGTCA
 A C G T A C G T G T C A C G T A A C G T A T G C A G C T A G T C G T C A A G T C A G C T A G T C A C G T C G T A A C T G A C T G A T G C G A T C A C G T
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AATSTCAYTCTAGKSC-
-GGGTTACTANAGGTCA
 G T C A C G T A A C G T A T G C A G C T A G T C G T C A A G T C A G C T A G T C A C G T C G T A A C T G A C T G A T G C G A T C A C G T
A C G T C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AATSTCAYTCTAGKSC--
---ACCACTCTCGGTCAC
 G T C A C G T A A C G T A T G C A G C T A G T C G T C A A G T C A G C T A G T C A C G T C G T A A C T G A C T G A T G C G A T C A C G T A C G T
A C G T A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AATSTCAYTCTAGKSC--
---AGTATTCTCGGTTGC
 G T C A C G T A A C G T A T G C A G C T A G T C G T C A A G T C A G C T A G T C A C G T C G T A A C T G A C T G A T G C G A T C A C G T A C G T
A C G T A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:AATSTCAYTCTAGKSC-
---------CTAGGCCT
 G T C A C G T A A C G T A T G C A G C T A G T C G T C A A G T C A G C T A G T C A C G T C G T A A C T G A C T G A T G C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AATSTCAYTCTAGKSC-
--BCNGGTTCTAGANCN
 G T C A C G T A A C G T A T G C A G C T A G T C G T C A A G T C A G C T A G T C A C G T C G T A A C T G A C T G A T G C G A T C A C G T
A C G T A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:AATSTCAYTCTAGKSC--
---NNAATTCTCGNTNAN
 G T C A C G T A A C G T A T G C A G C T A G T C G T C A A G T C A G C T A G T C A C G T C G T A A C T G A C T G A T G C G A T C A C G T A C G T
A C G T A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.48
Offset:7
Orientation:forward strand
Alignment:AATSTCAYTCTAGKSC-
-------NTCAAGGTCA
 G T C A C G T A A C G T A T G C A G C T A G T C G T C A A G T C A G C T A G T C A C G T C G T A A C T G A C T G A T G C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Bcl6/MA0463.1/Jaspar

Match Rank:9
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:AATSTCAYTCTAGKSC-
---NGCTTTCTAGGAAN
 G T C A C G T A A C G T A T G C A G C T A G T C G T C A A G T C A G C T A G T C A C G T C G T A A C T G A C T G A T G C G A T C A C G T
A C G T A C G T A C G T C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

PB0181.1_Spdef_2/Jaspar

Match Rank:10
Score:0.47
Offset:0
Orientation:forward strand
Alignment:AATSTCAYTCTAGKSC
GATAACATCCTAGTAG
 G T C A C G T A A C G T A T G C A G C T A G T C G T C A A G T C A G C T A G T C A C G T C G T A A C T G A C T G A T G C G A T C
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G