Information for 6-CTGATTCTAGTGGCCA (Motif 10)

A T G C G A C T C T A G C G T A A C G T A C G T A G T C G A C T T C G A T A C G A C G T A C T G A C T G G T A C T A G C T C G A
Reverse Opposite:
A C G T A T C G A C T G G T A C A G T C G T C A A G T C A G C T C G T A T A C G C G T A C G T A G A C T G A T C C T G A A T C G
p-value:1e-11
log p-value:-2.634e+01
Information Content per bp:1.704
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.9 +/- 23.6bp
Average Position of motif in Background52.2 +/- 9.8bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGATTCTAGTGGCCA
NNTGTTTATTTTGGCA-
 A C G T A T G C G A C T C T A G C G T A A C G T A C G T A G T C G A C T T C G A T A C G A C G T A C T G A C T G G T A C T A G C T C G A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGATTCTAGTGGCCA-
-AAATTCAAGTGGNTTN
 A T G C G A C T C T A G C G T A A C G T A C G T A G T C G A C T T C G A T A C G A C G T A C T G A C T G G T A C T A G C T C G A A C G T
A C G T C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGATTCTAGTGGCCA-
NANTTTCAAGTGGTTAN
 A T G C G A C T C T A G C G T A A C G T A C G T A G T C G A C T T C G A T A C G A C G T A C T G A C T G G T A C T A G C T C G A A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGATTCTAGTGGCCA-
-AANTTCAAGTGGCTTN
 A T G C G A C T C T A G C G T A A C G T A C G T A G T C G A C T T C G A T A C G A C G T A C T G A C T G G T A C T A G C T C G A A C G T
A C G T C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CTGATTCTAGTGGCCA
----NTCAAGTGG---
 A T G C G A C T C T A G C G T A A C G T A C G T A G T C G A C T T C G A T A C G A C G T A C T G A C T G G T A C T A G C T C G A
A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CTGATTCTAGTGGCCA
----NTCAAGTGGN--
 A T G C G A C T C T A G C G T A A C G T A C G T A G T C G A C T T C G A T A C G A C G T A C T G A C T G G T A C T A G C T C G A
A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTGATTCTAGTGGCCA-
-AATTTCAAGTGGCTTN
 A T G C G A C T C T A G C G T A A C G T A C G T A G T C G A C T T C G A T A C G A C G T A C T G A C T G G T A C T A G C T C G A A C G T
A C G T C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CTGATTCTAGTGGCCA
--GGTTGCCATGGCAA
 A T G C G A C T C T A G C G T A A C G T A C G T A G T C G A C T T C G A T A C G A C G T A C T G A C T G G T A C T A G C T C G A
A C G T A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.50
Offset:9
Orientation:forward strand
Alignment:CTGATTCTAGTGGCCA
---------TTGGCA-
 A T G C G A C T C T A G C G T A A C G T A C G T A G T C G A C T T C G A T A C G A C G T A C T G A C T G G T A C T A G C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CTGATTCTAGTGGCCA
CNGTGATTTN--------
 A C G T A C G T A T G C G A C T C T A G C G T A A C G T A C G T A G T C G A C T T C G A T A C G A C G T A C T G A C T G G T A C T A G C T C G A
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T