Information for 3-ATTATAACCTGAA (Motif 9)

C T G A A C G T A C G T C G T A C G A T C T G A C G T A A G T C A G T C A C G T C T A G G T C A C G T A
Reverse Opposite:
A C G T A C G T A G T C C G T A A C T G A C T G A C G T A G C T C G T A A C G T C G T A C G T A A G C T
p-value:1e-11
log p-value:-2.543e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 18.0bp
Average Position of motif in Background36.3 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATTATAACCTGAA
ATTAACACCT---
 C T G A A C G T A C G T C G T A C G A T C T G A C G T A A G T C A G T C A C G T C T A G G T C A C G T A
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATTATAACCTGAA
NCGTATTATAATCNTA-
 A C G T A C G T A C G T A C G T C T G A A C G T A C G T C G T A C G A T C T G A C G T A A G T C A G T C A C G T C T A G G T C A C G T A
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATTATAACCTGAA
NAATTTTATTACCTNN-
 A C G T A C G T A C G T A C G T C T G A A C G T A C G T C G T A C G A T C T G A C G T A A G T C A G T C A C G T C T A G G T C A C G T A
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A A C G T

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:ATTATAACCTGAA-
----TGACCTTGAT
 C T G A A C G T A C G T C G T A C G A T C T G A C G T A A G T C A G T C A C G T C T A G G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0079.1_Sry_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATTATAACCTGAA
TATAATTATAATATTC-
 A C G T A C G T A C G T A C G T C T G A A C G T A C G T C G T A C G A T C T G A C G T A A G T C A G T C A C G T C T A G G T C A C G T A
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATTATAACCTGAA
--NATGACCTTGA
 C T G A A C G T A C G T C G T A C G A T C T G A C G T A A G T C A G T C A C G T C T A G G T C A C G T A
A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Esrra/MA0592.2/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ATTATAACCTGAA-
---ATGACCTTGAA
 C T G A A C G T A C G T C G T A C G A T C T G A C G T A A G T C A G T C A C G T C T A G G T C A C G T A A C G T
A C G T A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

PH0013.1_Cdx2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATTATAACCTGAA
NAATTTTATTACCNNN-
 A C G T A C G T A C G T A C G T C T G A A C G T A C G T C G T A C G A T C T G A C G T A A G T C A G T C A C G T C T A G G T C A C G T A
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ATTATAACCTGAA
----TGACCTYA-
 C T G A A C G T A C G T C G T A C G A T C T G A C G T A A G T C A G T C A C G T C T A G G T C A C G T A
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ATTATAACCTGAA
----TGACCT---
 C T G A A C G T A C G T C G T A C G A T C T G A C G T A A G T C A G T C A C G T C T A G G T C A C G T A
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T