Information for 8-CGCTGGCATT (Motif 45)

A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C T G
p-value:1e-6
log p-value:-1.418e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.3 +/- 17.7bp
Average Position of motif in Background57.9 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CGCTGGCATT
GGTTGGCAT-
 A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CGCTGGCATT--
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CGCTGGCATT---
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGCTGGCATT
-NTTGGCANN
 A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGCTGGCATT
NGTGGGCAT-
 A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGCTGGCATT
--TTGGCA--
 A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CGCTGGCATT--
CAATCACTGGCAGAAT
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGCTGGCATT
-CTTGGCAA-
 A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGCTGGCATT
GGTCTGGCAT-
 A C G T A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGCTGGCATT
VGCTGWCAVB
 A G T C A C T G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C