Information for 21-ACGGCGCAGAAAC (Motif 39)

C G T A A G T C A C T G C T A G A T G C A C T G A G T C C G T A A C T G C G T A C T G A C G T A A G T C
Reverse Opposite:
A C T G A C G T A G C T A C G T A G T C A C G T A C T G A G T C T A C G A G T C A G T C T C A G A C G T
p-value:1e-7
log p-value:-1.828e+01
Information Content per bp:1.925
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.0 +/- 27.7bp
Average Position of motif in Background44.8 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ACGGCGCAGAAAC-
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T C G T A A G T C A C T G C T A G A T G C A C T G A G T C C G T A A C T G C G T A C T G A C G T A A G T C A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ACGGCGCAGAAAC-
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T C G T A A G T C A C T G C T A G A T G C A C T G A G T C C G T A A C T G C G T A C T G A C G T A A G T C A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

IRF9/MA0653.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ACGGCGCAGAAAC-
AACGAAACCGAAACT
 A C G T C G T A A G T C A C T G C T A G A T G C A C T G A G T C C G T A A C T G C G T A C T G A C G T A A G T C A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ACGGCGCAGAAAC--
-----ACTGAAACCA
 C G T A A G T C A C T G C T A G A T G C A C T G A G T C C G T A A C T G C G T A C T G A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:ACGGCGCAGAAAC---
-CCGCATAGCAACGGA
 C G T A A G T C A C T G C T A G A T G C A C T G A G T C C G T A A C T G C G T A C T G A C G T A A G T C A C G T A C G T A C G T
A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0179.1_Sp100_2/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ACGGCGCAGAAAC-
TCCGTCGCTTAAAAG
 A C G T C G T A A G T C A C T G C T A G A T G C A C T G A G T C C G T A A C T G C G T A C T G A C G T A A G T C A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

IRF8/MA0652.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ACGGCGCAGAAAC-
TCGAAACCGAAACT
 C G T A A G T C A C T G C T A G A T G C A C T G A G T C C G T A A C T G C G T A C T G A C G T A A G T C A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:ACGGCGCAGAAAC--
---SCCTAGCAACAG
 C G T A A G T C A C T G C T A G A T G C A C T G A G T C C G T A A C T G C G T A C T G A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-ACGGCGCAGAAAC--
CGAAGCACACAAAATA
 A C G T C G T A A G T C A C T G C T A G A T G C A C T G A G T C C G T A A C T G C G T A C T G A C G T A A G T C A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-ACGGCGCAGAAAC
TTTGGCGCCAAA--
 A C G T C G T A A G T C A C T G C T A G A T G C A C T G A G T C C G T A A C T G C G T A C T G A C G T A A G T C
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T