Information for 13-GCTCCCATCTCYTGCC (Motif 19)

A C T G A G T C A C G T A G T C G T A C G T A C C T G A C G A T G A T C A C G T A G T C G A C T A C G T A C T G A G T C G T A C
Reverse Opposite:
A C T G A C T G T G A C G T C A C T A G A C T G T G C A C A T G G C T A A G C T A C T G A C T G A C T G C G T A A C T G A G T C
p-value:1e-10
log p-value:-2.307e+01
Information Content per bp:1.774
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.5 +/- 11.2bp
Average Position of motif in Background41.9 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCTCCCATCTCYTGCC
GCTCCG----------
 A C T G A G T C A C G T A G T C G T A C G T A C C T G A C G A T G A T C A C G T A G T C G A C T A C G T A C T G A G T C G T A C
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCCATCTCYTGCC
NGCTN------------
 A C G T A C T G A G T C A C G T A G T C G T A C G T A C C T G A C G A T G A T C A C G T A G T C G A C T A C G T A C T G A G T C G T A C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCTCCCATCTCYTGCC
CNGTCCTCCC----------
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C G T A C G T A C C T G A C G A T G A T C A C G T A G T C G A C T A C G T A C T G A G T C G T A C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCCATCTCYTGCC
GGCTCYAKCAYC-----
 A C G T A C T G A G T C A C G T A G T C G T A C G T A C C T G A C G A T G A T C A C G T A G T C G A C T A C G T A C T G A G T C G T A C
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCCATCTCYTGCC
GKMTCADRTTWC-----
 A C G T A C T G A G T C A C G T A G T C G T A C G T A C C T G A C G A T G A T C A C G T A G T C G A C T A C G T A C T G A G T C G T A C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GCTCCCATCTCYTGCC
NNGCACCTTTCTCC----
 A C G T A C G T A C T G A G T C A C G T A G T C G T A C G T A C C T G A C G A T G A T C A C G T A G T C G A C T A C G T A C T G A G T C G T A C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GCTCCCATCTCYTGCC
GKVTCADRTTWC-----
 A C G T A C T G A G T C A C G T A G T C G T A C G T A C C T G A C G A T G A T C A C G T A G T C G A C T A C G T A C T G A G T C G T A C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:GCTCCCATCTCYTGCC--
-------NNACTTGCCTT
 A C T G A G T C A C G T A G T C G T A C G T A C C T G A C G A T G A T C A C G T A G T C G A C T A C G T A C T G A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.49
Offset:-8
Orientation:forward strand
Alignment:--------GCTCCCATCTCYTGCC
CGAACAGTGCTCACTAT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C G T A C G T A C C T G A C G A T G A T C A C G T A G T C G A C T A C G T A C T G A G T C G T A C
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.46
Offset:6
Orientation:forward strand
Alignment:GCTCCCATCTCYTGCC
------ATTTCCTGTN
 A C T G A G T C A C G T A G T C G T A C G T A C C T G A C G A T G A T C A C G T A G T C G A C T A C G T A C T G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G