Information for 5-CTGAGCTGCCKCT (Motif 8)

G T A C C A G T A C T G T C G A A T C G A G T C A C G T A T C G A T G C A G T C C A T G G T A C A G C T
Reverse Opposite:
C T G A C A T G G T A C C T A G A T C G A T G C C G T A A C T G A T G C A C G T A G T C G C T A A C T G
p-value:1e-9
log p-value:-2.242e+01
Information Content per bp:1.787
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif41.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets40.5 +/- 22.8bp
Average Position of motif in Background50.5 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGAGCTGCCKCT
CGCAGCTGCG---
 G T A C C A G T A C T G T C G A A T C G A G T C A C G T A T C G A T G C A G T C C A T G G T A C A G C T
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGAGCTGCCKCT
TGCAGCTGTCCCT
 G T A C C A G T A C T G T C G A A T C G A G T C A C G T A T C G A T G C A G T C C A T G G T A C A G C T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTGAGCTGCCKCT
---NGCTN-----
 G T A C C A G T A C T G T C G A A T C G A G T C A C G T A T C G A T G C A G T C C A T G G T A C A G C T
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTGAGCTGCCKCT-
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T G T A C C A G T A C T G T C G A A T C G A G T C A C G T A T C G A T G C A G T C C A T G G T A C A G C T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGCTGCCKCT
NNGCAGCTGTC---
 A C G T G T A C C A G T A C T G T C G A A T C G A G T C A C G T A T C G A T G C A G T C C A T G G T A C A G C T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGCTGCCKCT---
NNNCAGCTGTCAATATN
 A C G T G T A C C A G T A C T G T C G A A T C G A G T C A C G T A T C G A T G C A G T C C A T G G T A C A G C T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGAGCTGCCKCT
AGCAGCTGCTNN-
 G T A C C A G T A C T G T C G A A T C G A G T C A C G T A T C G A T G C A G T C C A T G G T A C A G C T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTGAGCTGCCKCT-----
---AGATGCTRCTRCCHT
 G T A C C A G T A C T G T C G A A T C G A G T C A C G T A T C G A T G C A G T C C A T G G T A C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGAGCTGCCKCT
CGGAGC-------
 G T A C C A G T A C T G T C G A A T C G A G T C A C G T A T C G A T G C A G T C C A T G G T A C A G C T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGCTGCCKCT
NNGCAGCTGTT---
 A C G T G T A C C A G T A C T G T C G A A T C G A G T C A C G T A T C G A T G C A G T C C A T G G T A C A G C T
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T