Information for 4-GGAAATKCCT (Motif 2)

C T A G A C T G C T G A C G T A C T G A C G A T C A G T T A G C G T A C C G A T
Reverse Opposite:
C G T A C A T G A T C G G T C A G C T A G A C T A C G T A G C T G T A C G A T C
p-value:1e-16
log p-value:-3.865e+01
Information Content per bp:1.690
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif9.78%
Number of Background Sequences with motif1487.4
Percentage of Background Sequences with motif3.18%
Average Position of motif in Targets46.4 +/- 24.4bp
Average Position of motif in Background49.4 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GGAAATKCCT
GGAAATTCCC
 C T A G A C T G C T G A C G T A C T G A C G A T C A G T T A G C G T A C C G A T
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGAAATKCCT
GGAAATTCCC
 C T A G A C T G C T G A C G T A C T G A C G A T C A G T T A G C G T A C C G A T
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGAAATKCCT-----
AGAAATGACTTCCCT
 C T A G A C T G C T G A C G T A C T G A C G A T C A G T T A G C G T A C C G A T A C G T A C G T A C G T A C G T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GGAAATKCCT
NACAGGAAAT----
 A C G T A C G T A C G T A C G T C T A G A C T G C T G A C G T A C T G A C G A T C A G T T A G C G T A C C G A T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGAAATKCCT-
GGGAAATCCCCN
 A C G T C T A G A C T G C T G A C G T A C T G A C G A T C A G T T A G C G T A C C G A T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGAAATKCCT
GGAAATCCCC
 C T A G A C T G C T G A C G T A C T G A C G A T C A G T T A G C G T A C C G A T
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGAAATKCCT
GGAAANCCCC
 C T A G A C T G C T G A C G T A C T G A C G A T C A G T T A G C G T A C C G A T
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

PB0012.1_Elf3_1/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GGAAATKCCT
AACAAGGAAGTAA--
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T G A C G T A C T G A C G A T C A G T T A G C G T A C C G A T
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGAAATKCCT
NNTGGAAANN---
 A C G T A C G T A C G T C T A G A C T G C T G A C G T A C T G A C G A T C A G T T A G C G T A C C G A T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GGAAATKCCT
TTAAGAGGAAGTTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T G A C G T A C T G A C G A T C A G T T A G C G T A C C G A T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T