Information for 1-CRGGTCAYCBTGACMY (Motif 3)

G A T C C T A G C T A G C T A G A C G T A G T C T C G A A G C T A T G C A C T G C G A T C T A G G T C A G T A C G T A C A G C T
Reverse Opposite:
T C G A C A T G C A T G C A G T A G T C C G T A T G A C T A C G T C G A A C G T C T A G G T C A A G T C G A T C G A T C C T A G
p-value:1e-24
log p-value:-5.579e+01
Information Content per bp:1.601
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif7.17%
Number of Background Sequences with motif600.5
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets53.7 +/- 24.2bp
Average Position of motif in Background49.8 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:CRGGTCAYCBTGACMY
NAGGTCACNNTGACC-
 G A T C C T A G C T A G C T A G A C G T A G T C T C G A A G C T A T G C A C T G C G A T C T A G G T C A G T A C G T A C A G C T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.90
Offset:1
Orientation:forward strand
Alignment:CRGGTCAYCBTGACMY
-AGGTCACCCTGACCT
 G A T C C T A G C T A G C T A G A C G T A G T C T C G A A G C T A T G C A C T G C G A T C T A G G T C A G T A C G T A C A G C T
A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:CRGGTCAYCBTGACMY-
CAGGTCACCGTGACCTT
 G A T C C T A G C T A G C T A G A C G T A G T C T C G A A G C T A T G C A C T G C G A T C T A G G T C A G T A C G T A C A G C T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

PPARG/MA0066.1/Jaspar

Match Rank:4
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CRGGTCAYCBTGACMY--
AGTAGGTCACNGTGACCTAC
 A C G T A C G T G A T C C T A G C T A G C T A G A C G T A G T C T C G A A G C T A T G C A C T G C G A T C T A G G T C A G T A C G T A C A G C T A C G T A C G T
G C T A A T C G C A G T C T G A C T A G A C T G C A G T A T G C G T C A G A T C T A G C A C T G C A G T A T C G T G C A G A T C A T G C A G C T C G T A A T G C

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CRGGTCAYCBTGACMY
GTAGGTCACTGGGTCA-
 A C G T G A T C C T A G C T A G C T A G A C G T A G T C T C G A A G C T A T G C A C T G C G A T C T A G G T C A G T A C G T A C A G C T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CRGGTCAYCBTGACMY
-AGGTCA---------
 G A T C C T A G C T A G C T A G A C G T A G T C T C G A A G C T A T G C A C T G C G A T C T A G G T C A G T A C G T A C A G C T
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CRGGTCAYCBTGACMY
CGCGCCGGGTCACGTA-----
 A C G T A C G T A C G T A C G T A C G T G A T C C T A G C T A G C T A G A C G T A G T C T C G A A G C T A T G C A C T G C G A T C T A G G T C A G T A C G T A C A G C T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CRGGTCAYCBTGACMY
AGRGGTCA---------
 A C G T G A T C C T A G C T A G C T A G A C G T A G T C T C G A A G C T A T G C A C T G C G A T C T A G G T C A G T A C G T A C A G C T
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CRGGTCAYCBTGACMY
---GTCATN-------
 G A T C C T A G C T A G C T A G A C G T A G T C T C G A A G C T A T G C A C T G C G A T C T A G G T C A G T A C G T A C A G C T
A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CRGGTCAYCBTGACMY
TRAGGTCA---------
 A C G T G A T C C T A G C T A G C T A G A C G T A G T C T C G A A G C T A T G C A C T G C G A T C T A G G T C A G T A C G T A C A G C T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T