Information for 7-CCAAGTCTGSCACAGA (Motif 23)

A G T C A G T C C G T A C T G A A C T G A G C T A T G C G A C T A C T G A T C G A G T C G C T A G T A C C G T A T A C G C G T A
Reverse Opposite:
G C A T A T G C A C G T A C T G C G A T A C T G A T G C T G A C C G T A T A C G C T G A G T A C G A C T A C G T A C T G A C T G
p-value:1e-8
log p-value:-2.065e+01
Information Content per bp:1.761
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.2 +/- 24.2bp
Average Position of motif in Background52.2 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CCAAGTCTGSCACAGA
-----CCAGGAACAG-
 A G T C A G T C C G T A C T G A A C T G A G C T A T G C G A C T A C T G A T C G A G T C G C T A G T A C C G T A T A C G C G T A
A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCAAGTCTGSCACAGA
TGCCAA------------
 A C G T A C G T A G T C A G T C C G T A C T G A A C T G A G C T A T G C G A C T A C T G A T C G A G T C G C T A G T A C C G T A T A C G C G T A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CCAAGTCTGSCACAGA
CGTGCCAAG-----------
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T G A A C T G A G C T A T G C G A C T A C T G A T C G A G T C G C T A G T A C C G T A T A C G C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CCAAGTCTGSCACAGA
---TGTCTGDCACCT-
 A G T C A G T C C G T A C T G A A C T G A G C T A T G C G A C T A C T G A T C G A G T C G C T A G T A C C G T A T A C G C G T A
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:5
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CCAAGTCTGSCACAGA----
VCAKCTGGNNNCCAGMTGBN
 A G T C A G T C C G T A C T G A A C T G A G C T A T G C G A C T A C T G A T C G A G T C G C T A G T A C C G T A T A C G C G T A A C G T A C G T A C G T A C G T
T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C

CREB3L1/MA0839.1/Jaspar

Match Rank:6
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CCAAGTCTGSCACAGA
ATGCCACGTCATCA-----
 A C G T A C G T A C G T A G T C A G T C C G T A C T G A A C T G A G C T A T G C G A C T A C T G A T C G A G T C G C T A G T A C C G T A T A C G C G T A
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CCAAGTCTGSCACAGA
-CAGGTGAGG------
 A G T C A G T C C G T A C T G A A C T G A G C T A T G C G A C T A C T G A T C G A G T C G C T A G T A C C G T A T A C G C G T A
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----CCAAGTCTGSCACAGA
GGTGCCAAGT----------
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T G A A C T G A G C T A T G C G A C T A C T G A T C G A G T C G C T A G T A C C G T A T A C G C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.49
Offset:10
Orientation:reverse strand
Alignment:CCAAGTCTGSCACAGA
----------CACAGN
 A G T C A G T C C G T A C T G A A C T G A G C T A T G C G A C T A C T G A T C G A G T C G C T A G T A C C G T A T A C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Creb3l2/MA0608.1/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CCAAGTCTGSCACAGA
GCCACGTGT--------
 A C G T A G T C A G T C C G T A C T G A A C T G A G C T A T G C G A C T A C T G A T C G A G T C G C T A G T A C C G T A T A C G C G T A
A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T