Information for 1-ATGAGTCAYN (Motif 1)

T C G A A C G T C A T G G C T A A T C G C A G T G T A C G T C A A G C T T G A C
Reverse Opposite:
A C T G T C G A A C G T C A T G G T C A T A G C C G A T G T A C T G C A A G C T
p-value:1e-50
log p-value:-1.157e+02
Information Content per bp:1.605
Number of Target Sequences with motif104.0
Percentage of Target Sequences with motif13.32%
Number of Background Sequences with motif977.6
Percentage of Background Sequences with motif2.03%
Average Position of motif in Targets51.1 +/- 25.8bp
Average Position of motif in Background50.6 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:1
Score:0.98
Offset:-2
Orientation:forward strand
Alignment:--ATGAGTCAYN
NNATGASTCATH
 A C G T A C G T T C G A A C G T C A T G G C T A A T C G C A G T G T A C G T C A A G C T T G A C
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:2
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:ATGAGTCAYN
ATGASTCATY
 T C G A A C G T C A T G G C T A A T C G C A G T G T A C G T C A A G C T T G A C
T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:3
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-ATGAGTCAYN-
NATGASTCABNN
 A C G T T C G A A C G T C A T G G C T A A T C G C A G T G T A C G T C A A G C T T G A C A C G T
C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-ATGAGTCAYN
DATGASTCAT-
 A C G T T C G A A C G T C A T G G C T A A T C G C A G T G T A C G T C A A G C T T G A C
C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-ATGAGTCAYN
GATGAGTCAT-
 A C G T T C G A A C G T C A T G G C T A A T C G C A G T G T A C G T C A A G C T T G A C
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T A C G T

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:6
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-ATGAGTCAYN-
DATGASTCATHN
 A C G T T C G A A C G T C A T G G C T A A T C G C A G T G T A C G T C A A G C T T G A C A C G T
C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T G A T C G T A C

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--ATGAGTCAYN
NNATGAGTCATN
 A C G T A C G T T C G A A C G T C A T G G C T A A T C G C A G T G T A C G T C A A G C T T G A C
C A T G C T A G T C G A A C G T A C T G C G T A A T C G A C G T G T A C C G T A A G C T G A T C

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:8
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-ATGAGTCAYN-
GATGAGTCATCC
 A C G T T C G A A C G T C A T G G C T A A T C G C A G T G T A C G T C A A G C T T G A C A C G T
C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C

FOS/MA0476.1/Jaspar

Match Rank:9
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-ATGAGTCAYN
NATGAGTCANN
 A C G T T C G A A C G T C A T G G C T A A T C G C A G T G T A C G T C A A G C T T G A C
T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A

JUNB/MA0490.1/Jaspar

Match Rank:10
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:ATGAGTCAYN-
ATGAGTCATCN
 T C G A A C G T C A T G G C T A A T C G C A G T G T A C G T C A A G C T T G A C A C G T
T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C