Information for 21-CCTGGCGCCAGGG (Motif 28)

A G T C A G T C A C G T A C T G A T C G A G T C A C T G A G T C A G T C C G T A A C T G C T A G C T A G
Reverse Opposite:
A G T C A G T C A G T C A C G T A C T G A C T G A G T C A C T G A T G C A G T C C G T A A C T G T A C G
p-value:1e-8
log p-value:-1.938e+01
Information Content per bp:1.905
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.7 +/- 13.1bp
Average Position of motif in Background11.5 +/- 0.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGCGCCAGGG-
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A T C G A G T C A C T G A G T C A G T C C G T A A C T G C T A G C T A G A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCTGGCGCCAGGG--
CCTTCGGCGCCAAAAGG
 A C G T A C G T A G T C A G T C A C G T A C T G A T C G A G T C A C T G A G T C A G T C C G T A A C T G C T A G C T A G A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTGGCGCCAGGG
TTTGGCGCCAAA-
 A G T C A G T C A C G T A C T G A T C G A G T C A C T G A G T C A G T C C G T A A C T G C T A G C T A G
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCTGGCGCCAGGG--
---GTCCCCAGGGGA
 A G T C A G T C A C G T A C T G A T C G A G T C A C T G A G T C A G T C C G T A A C T G C T A G C T A G A C G T A C G T
A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

CRE(bZIP)/Promoter/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCTGGCGCCAGGG
-GTGACGTCACCG
 A G T C A G T C A C G T A C T G A T C G A G T C A C T G A G T C A G T C C G T A A C T G C T A G C T A G
A C G T T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCTGGCGCCAGGG
-CTGTTGCTAGGS
 A G T C A G T C A C G T A C T G A T C G A G T C A C T G A G T C A G T C C G T A A C T G C T A G C T A G
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCTGGCGCCAGGG
---CGTGCCAAG-
 A G T C A G T C A C G T A C T G A T C G A G T C A C T G A G T C A G T C C G T A A C T G C T A G C T A G
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

CREB1/MA0018.2/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCTGGCGCCAGGG
--TGACGTCA---
 A G T C A G T C A C G T A C T G A T C G A G T C A C T G A G T C A G T C C G T A A C T G C T A G C T A G
A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCTGGCGCCAGGG
-WTGSCCTSAGGS
 A G T C A G T C A C G T A C T G A T C G A G T C A C T G A G T C A G T C C G T A A C T G C T A G C T A G
A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCTGGCGCCAGGG
-----TGCCAA--
 A G T C A G T C A C G T A C T G A T C G A G T C A C T G A G T C A G T C C G T A A C T G C T A G C T A G
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T