Information for 6-TAAAGCAGCCGCC (Motif 7)

A G C T C G T A C G T A C G T A A C T G A T G C G C T A A T C G A G T C A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C T G A C T G A T G C C G A T A T C G A G T C A C G T A C G T A C G T C T G A
p-value:1e-13
log p-value:-3.199e+01
Information Content per bp:1.943
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.0 +/- 20.9bp
Average Position of motif in Background76.5 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TAAAGCAGCCGCC
---AGCAGCTGCT
 A G C T C G T A C G T A C G T A A C T G A T G C G C T A A T C G A G T C A G T C A C T G A G T C A G T C
A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TAAAGCAGCCGCC
-NNAGCAGCTGCT
 A G C T C G T A C G T A C G T A A C T G A T G C G C T A A T C G A G T C A G T C A C T G A G T C A G T C
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TAAAGCAGCCGCC
---CGCAGCTGCG
 A G C T C G T A C G T A C G T A A C T G A T G C G C T A A T C G A G T C A G T C A C T G A G T C A G T C
A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TAAAGCAGCCGCC
--CAGCAGCTGN-
 A G C T C G T A C G T A C G T A A C T G A T G C G C T A A T C G A G T C A G T C A C T G A G T C A G T C
A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TAAAGCAGCCGCC
NGYCATAAAWCH------
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A C G T A A C T G A T G C G C T A A T C G A G T C A G T C A C T G A G T C A G T C
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TAAAGCAGCCGCC------
--AAGCATACGCCCAACTT
 A G C T C G T A C G T A C G T A A C T G A T G C G C T A A T C G A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TAAAGCAGCCGCC----
CTCAGCAGCTGCTACTG
 A G C T C G T A C G T A C G T A A C T G A T G C G C T A A T C G A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TAAAGCAGCCGCC
--NNACAGCTGC-
 A G C T C G T A C G T A C G T A A C T G A T G C G C T A A T C G A G T C A G T C A C T G A G T C A G T C
A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TAAAGCAGCCGCC---
---TGCAGCTGTCCCT
 A G C T C G T A C G T A C G T A A C T G A T G C G C T A A T C G A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TAAAGCAGCCGCC-
----GGTCCCGCCC
 A G C T C G T A C G T A C G T A A C T G A T G C G C T A A T C G A G T C A G T C A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C