Information for 5-TKGSASTTCYCAT (Motif 5)

A C G T A C T G A C T G A T C G C G T A A T G C A G C T C G A T A G T C A G T C A G T C C T G A A C G T
Reverse Opposite:
C G T A A G C T A C T G C T A G C T A G C G T A C T G A A T C G A C G T A T G C A G T C G T A C G T C A
p-value:1e-14
log p-value:-3.243e+01
Information Content per bp:1.779
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif21.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets43.2 +/- 29.4bp
Average Position of motif in Background55.1 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TKGSASTTCYCAT
-GGGAATTTCC--
 A C G T A C T G A C T G A T C G C G T A A T G C A G C T C G A T A G T C A G T C A G T C C T G A A C G T
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TKGSASTTCYCAT
NGGGGATTTCCC--
 A C G T A C G T A C T G A C T G A T C G C G T A A T G C A G C T C G A T A G T C A G T C A G T C C T G A A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TKGSASTTCYCAT
-GGGAATTTCC--
 A C G T A C T G A C T G A T C G C G T A A T G C A G C T C G A T A G T C A G T C A G T C C T G A A C G T
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TKGSASTTCYCAT--
---CACTTCCYCTTT
 A C G T A C T G A C T G A T C G C G T A A T G C A G C T C G A T A G T C A G T C A G T C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TKGSASTTCYCAT
-GGGGATTTCC--
 A C G T A C T G A C T G A T C G C G T A A T G C A G C T C G A T A G T C A G T C A G T C C T G A A C G T
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TKGSASTTCYCAT---
TAGTATTTCCGATCTT
 A C G T A C T G A C T G A T C G C G T A A T G C A G C T C G A T A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T
C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TKGSASTTCYCAT-
----ATTTTCCATT
 A C G T A C T G A C T G A T C G C G T A A T G C A G C T C G A T A G T C A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TKGSASTTCYCAT----
NNNTCCATCCCATAANN
 A C G T A C T G A C T G A T C G C G T A A T G C A G C T C G A T A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TKGSASTTCYCAT-
----HTTTCCCASG
 A C G T A C T G A C T G A T C G C G T A A T G C A G C T C G A T A G T C A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TKGSASTTCYCAT
-GGGGATTTCC--
 A C G T A C T G A C T G A T C G C G T A A T G C A G C T C G A T A G T C A G T C A G T C C T G A A C G T
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T