Information for 3-TGTTTRCWTWDNN (Motif 3)

A C G T T A C G A C G T A C G T A C G T C T G A G A T C G C A T A G C T G C T A C T G A C A G T G A C T
Reverse Opposite:
C T A G G T A C G A C T C G A T T C G A C G T A C T A G G A C T T G C A G T C A C G T A A T G C G T C A
p-value:1e-34
log p-value:-7.916e+01
Information Content per bp:1.581
Number of Target Sequences with motif131.0
Percentage of Target Sequences with motif15.86%
Number of Background Sequences with motif2145.5
Percentage of Background Sequences with motif4.54%
Average Position of motif in Targets51.2 +/- 26.0bp
Average Position of motif in Background49.4 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCWTWDNN
TGTTTACTTT---
 A C G T T A C G A C G T A C G T A C G T C T G A G A T C G C A T A G C T G C T A C T G A C A G T G A C T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCWTWDNN
TGTTTACTTT---
 A C G T T A C G A C G T A C G T A C G T C T G A G A T C G C A T A G C T G C T A C T G A C A G T G A C T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.94
Offset:-4
Orientation:forward strand
Alignment:----TGTTTRCWTWDNN
TCCATGTTTACTTTG--
 A C G T A C G T A C G T A C G T A C G T T A C G A C G T A C G T A C G T C T G A G A T C G C A T A G C T G C T A C T G A C A G T G A C T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:4
Score:0.94
Offset:0
Orientation:forward strand
Alignment:TGTTTRCWTWDNN
TGTTTACTTAGG-
 A C G T T A C G A C G T A C G T A C G T C T G A G A T C G C A T A G C T G C T A C T G A C A G T G A C T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.93
Offset:0
Orientation:forward strand
Alignment:TGTTTRCWTWDNN
TRTTTACTTW---
 A C G T T A C G A C G T A C G T A C G T C T G A G A T C G C A T A G C T G C T A C T G A C A G T G A C T
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTRCWTWDNN--
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T T A C G A C G T A C G T A C G T C T G A G A T C G C A T A G C T G C T A C T G A C A G T G A C T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---TGTTTRCWTWDNN
BSNTGTTTACWYWGN-
 A C G T A C G T A C G T A C G T T A C G A C G T A C G T A C G T C T G A G A T C G C A T A G C T G C T A C T G A C A G T G A C T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--TGTTTRCWTWDNN
CNTGTTTACATA---
 A C G T A C G T A C G T T A C G A C G T A C G T A C G T C T G A G A T C G C A T A G C T G C T A C T G A C A G T G A C T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTRCWTWDNN
TTTGTTTACTTA---
 A C G T A C G T A C G T T A C G A C G T A C G T A C G T C T G A G A T C G C A T A G C T G C T A C T G A C A G T G A C T
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.91
Offset:0
Orientation:forward strand
Alignment:TGTTTRCWTWDNN
TGTTTATTT----
 A C G T T A C G A C G T A C G T A C G T C T G A G A T C G C A T A G C T G C T A C T G A C A G T G A C T
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T