Information for 12-GCCAAATCCAAGG (Motif 12)

A C T G A G T C G T A C G T C A C G T A C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T A C T G A C T G C G T A G C A T A C G T A C G T A C T G A C T G A G T C
p-value:1e-10
log p-value:-2.505e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.2 +/- 33.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCCAAATCCAAGG
---ACWTCAAAGG
 A C T G A G T C G T A C G T C A C G T A C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C T G
A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCCAAATCCAAGG--
---ACATCAAAGGNA
 A C T G A G T C G T A C G T C A C G T A C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCCAAATCCAAGG
---ACATCAAAGG
 A C T G A G T C G T A C G T C A C G T A C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C T G
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCAAATCCAAGG----
NANAGATCAAAGGGNNN
 A C T G A G T C G T A C G T C A C G T A C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCCAAATCCAAGG-----
---AAGTTCAAGGTCAGC
 A C T G A G T C G T A C G T C A C G T A C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GCCAAATCCAAGG---
------NTCAAGGTCA
 A C T G A G T C G T A C G T C A C G T A C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCAAATCCAAGG----
NNNAGATCAAAGGANNN
 A C T G A G T C G T A C G T C A C G T A C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCAAATCCAAGG
GCCACACCCA---
 A C T G A G T C G T A C G T C A C G T A C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C T G
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCCAAATCCAAGG
--CAAATCACTG-
 A C T G A G T C G T A C G T C A C G T A C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C T G
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCCAAATCCAAGG--
-AAAGATCAAAGGAA
 A C T G A G T C G T A C G T C A C G T A C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A C G T
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A