Information for 6-CGGTTTTSAAGAT (Motif 7)

A G T C C T A G A C T G A G C T A C G T C A G T C G A T A T C G C G T A C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T A C G T A T C G C G T A G C T A C G T A C T G A G T A C A G T C C T A G
p-value:1e-18
log p-value:-4.310e+01
Information Content per bp:1.837
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 22.0bp
Average Position of motif in Background90.9 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CGGTTTTSAAGAT-
----TTTGAAACCG
 A G T C C T A G A C T G A G C T A C G T C A G T C G A T A T C G C G T A C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGGTTTTSAAGAT---
-AGATGKDGAGATAAG
 A G T C C T A G A C T G A G C T A C G T C A G T C G A T A T C G C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

HOXD11/MA0908.1/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGGTTTTSAAGAT
---NTTTTACGAC
 A G T C C T A G A C T G A G C T A C G T C A G T C G A T A T C G C G T A C G T A A C T G C G T A A C G T
A C G T A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGGTTTTSAAGAT---
--NNTNNCAATATTAG
 A G T C C T A G A C T G A G C T A C G T C A G T C G A T A T C G C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGGTTTTSAAGAT---
--NNTNNCAATATTAG
 A G T C C T A G A C T G A G C T A C G T C A G T C G A T A T C G C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

Esrra/MA0592.2/Jaspar

Match Rank:6
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CGGTTTTSAAGAT---
-----TTCAAGGTCAT
 A G T C C T A G A C T G A G C T A C G T C A G T C G A T A T C G C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

HOXC10/MA0905.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CGGTTTTSAAGAT
---NTTTTACGAC
 A G T C C T A G A C T G A G C T A C G T C A G T C G A T A T C G C G T A C G T A A C T G C G T A A C G T
A C G T A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CGGTTTTSAAGAT
---ATTTGAATT-
 A G T C C T A G A C T G A G C T A C G T C A G T C G A T A T C G C G T A C G T A A C T G C G T A A C G T
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.53
Offset:9
Orientation:forward strand
Alignment:CGGTTTTSAAGAT----
---------AGATAASR
 A G T C C T A G A C T G A G C T A C G T C A G T C G A T A T C G C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

HOXC11/MA0651.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CGGTTTTSAAGAT-
---NTTTTACGACC
 A G T C C T A G A C T G A G C T A C G T C A G T C G A T A T C G C G T A C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C