Information for 5-ATBATTAATGCAA (Motif 6)

C G T A A C G T A C T G C G T A A G C T A C G T G T C A C G T A A C G T A C T G A G T C C G T A C T G A
Reverse Opposite:
A G C T A C G T A C T G A G T C C G T A A C G T A C G T C G T A C T G A C G A T T A G C C G T A A C G T
p-value:1e-18
log p-value:-4.310e+01
Information Content per bp:1.852
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.4 +/- 14.1bp
Average Position of motif in Background28.2 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU4F1/MA0790.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ATBATTAATGCAA
CATTAATTATTCAT
 A C G T C G T A A C G T A C T G C G T A A G C T A C G T G T C A C G T A A C G T A C T G A G T C C G T A C T G A
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

POU4F3/MA0791.1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---ATBATTAATGCAA
CTCATTAATTATGCAT
 A C G T A C G T A C G T C G T A A C G T A C T G C G T A A G C T A C G T G T C A C G T A A C G T A C T G A G T C C G T A C T G A
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ATBATTAATGCAA
ATGCATAATTCA-
 C G T A A C G T A C T G C G T A A G C T A C G T G T C A C G T A A C G T A C T G A G T C C G T A C T G A
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ATBATTAATGCAA
WYATGCATWATGCAT
 A C G T A C G T C G T A A C G T A C T G C G T A A G C T A C G T G T C A C G T A A C G T A C T G A G T C C G T A C T G A
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATBATTAATGCAA--
ATGAATWATTCATGA
 C G T A A C G T A C T G C G T A A G C T A C G T G T C A C G T A A C G T A C T G A G T C C G T A C T G A A C G T A C G T
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A

POU4F2/MA0683.1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ATBATTAATGCAA
CTCATTAATTATGCAT
 A C G T A C G T A C G T C G T A A C G T A C T G C G T A A G C T A C G T G T C A C G T A A C G T A C T G A G T C C G T A C T G A
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.65
Offset:4
Orientation:forward strand
Alignment:ATBATTAATGCAA-
----MTGATGCAAT
 C G T A A C G T A C T G C G T A A G C T A C G T G T C A C G T A A C G T A C T G A G T C C G T A C T G A A C G T
A C G T A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATBATTAATGCAA
-TGATTGATGA--
 C G T A A C G T A C T G C G T A A G C T A C G T G T C A C G T A A C G T A C T G A G T C C G T A C T G A
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATBATTAATGCAA---
-ANATTTTTGCAANTN
 C G T A A C G T A C T G C G T A A G C T A C G T G T C A C G T A A C G T A C T G A G T C C G T A C T G A A C G T A C G T A C G T
A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:ATBATTAATGCAA-
----ATGATGCAAT
 C G T A A C G T A C T G C G T A A G C T A C G T G T C A C G T A A C G T A C T G A G T C C G T A C T G A A C G T
A C G T A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T