Information for 3-TGCCCTVGGG (Motif 5)

G C A T A T C G T G A C T A G C G A T C A G C T T A G C T C A G C T A G T A C G
Reverse Opposite:
A T G C G A T C A G T C A T C G T C G A C T A G A T C G A C T G T A G C C G T A
p-value:1e-24
log p-value:-5.647e+01
Information Content per bp:1.634
Number of Target Sequences with motif197.0
Percentage of Target Sequences with motif23.85%
Number of Background Sequences with motif5280.1
Percentage of Background Sequences with motif11.08%
Average Position of motif in Targets50.3 +/- 26.6bp
Average Position of motif in Background50.7 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:1
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTVGGG---
NTGCCCTAGGGCAA
 A C G T G C A T A T C G T G A C T A G C G A T C A G C T T A G C T C A G C T A G T A C G A C G T A C G T A C G T
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A

TFAP2B/MA0811.1/Jaspar

Match Rank:2
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:TGCCCTVGGG--
TGCCCTNGGGCA
 G C A T A T C G T G A C T A G C G A T C A G C T T A G C T C A G C T A G T A C G A C G T A C G T
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:3
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:TGCCCTVGGG--
TGCCCTNGGGCA
 G C A T A T C G T G A C T A G C G A T C A G C T T A G C T C A G C T A G T A C G A C G T A C G T
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-TGCCCTVGGG-
ATGCCCTGAGGC
 A C G T G C A T A T C G T G A C T A G C G A T C A G C T T A G C T C A G C T A G T A C G A C G T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:TGCCCTVGGG--
TGCCCNGGGGCA
 G C A T A T C G T G A C T A G C G A T C A G C T T A G C T C A G C T A G T A C G A C G T A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTVGGG---
NTGCCCANNGGTNA
 A C G T G C A T A T C G T G A C T A G C G A T C A G C T T A G C T C A G C T A G T A C G A C G T A C G T A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTVGGG-
WTGSCCTSAGGS
 A C G T G C A T A T C G T G A C T A G C G A T C A G C T T A G C T C A G C T A G T A C G A C G T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:8
Score:0.82
Offset:0
Orientation:forward strand
Alignment:TGCCCTVGGG---
TGCCCTGAGGGCA
 G C A T A T C G T G A C T A G C G A T C A G C T T A G C T C A G C T A G T A C G A C G T A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:9
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TGCCCTVGGG---
TGCCCTNAGGGCA
 G C A T A T C G T G A C T A G C G A T C A G C T T A G C T C A G C T A G T A C G A C G T A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:10
Score:0.82
Offset:0
Orientation:forward strand
Alignment:TGCCCTVGGG---
TGCCCTGAGGGCA
 G C A T A T C G T G A C T A G C G A T C A G C T T A G C T C A G C T A G T A C G A C G T A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A