p-value: | 1e-25 |
log p-value: | -5.902e+01 |
Information Content per bp: | 1.757 |
Number of Target Sequences with motif | 16.0 |
Percentage of Target Sequences with motif | 1.94% |
Number of Background Sequences with motif | 10.8 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 44.9 +/- 28.8bp |
Average Position of motif in Background | 57.3 +/- 28.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.92 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGGTCACCYTGAC- NAGGTCACNNTGACC |
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ESR2/MA0258.2/Jaspar
Match Rank: | 2 |
Score: | 0.88 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGGTCACCYTGAC-- AGGTCACCCTGACCT |
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ESR1/MA0112.3/Jaspar
Match Rank: | 3 |
Score: | 0.87 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGGTCACCYTGAC--- AAGGTCACGGTGACCTG |
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PPARG/MA0066.1/Jaspar
Match Rank: | 4 |
Score: | 0.78 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GGGTCACCYTGAC---- AGTAGGTCACNGTGACCTAC |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 5 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGGTCACCYTGAC AGGTCA------- |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 6 |
Score: | 0.70 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------GGGTCACCYTGAC CGCGCCGGGTCACGTA--- |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 7 |
Score: | 0.70 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGGTCACCYTGAC AGRGGTCA------- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 8 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGGTCACCYTGAC TRAGGTCA------- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 9 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGGTCACCYTGAC AAGGTCAC------ |
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PB0057.1_Rxra_1/Jaspar
Match Rank: | 10 |
Score: | 0.65 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------GGGTCACCYTGAC NTNNNGGGGTCANGNNN-- |
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