Information for 9-GCAGGTCACGTGACGC (Motif 28)

A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C T G A G T C
p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets78.0 +/- 12.9bp
Average Position of motif in Background54.0 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E-box(bHLH)/Promoter/Homer

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GCAGGTCACGTGACGC
-CCGGTCACGTGA---
 A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C A C T G A G T C
A C G T A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T A C G T A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:2
Score:0.76
Offset:4
Orientation:forward strand
Alignment:GCAGGTCACGTGACGC
----GTCACGTGAC--
 A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C A C T G A G T C
A C G T A C G T A C G T A C G T T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:3
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GCAGGTCACGTGACGC
--BRGTCACGTGAC--
 A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C A C T G A G T C
A C G T A C G T A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:4
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GCAGGTCACGTGACGC
---GGTCACGTGGC--
 A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C A C T G A G T C
A C G T A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGTCACGTGACGC----
NTNNTNGTCACGTGACNNNTNC
 A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C G T
C T A G G C A T C T G A A G C T C A G T T C A G T A C G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A G A T C A G C T T G A C G C A T C G A T G A T C G A T C

USF2/MA0526.1/Jaspar

Match Rank:6
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:GCAGGTCACGTGACGC
---GGTCACATGAC--
 A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C A C T G A G T C
A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:7
Score:0.71
Offset:4
Orientation:forward strand
Alignment:GCAGGTCACGTGACGC
----ATCACGTGAC--
 A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C A C T G A G T C
A C G T A C G T A C G T A C G T T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GCAGGTCACGTGACGC
---GGTCACGTGA---
 A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C A C T G A G T C
A C G T A C G T A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T A C G T A C G T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:9
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:GCAGGTCACGTGACGC
----GTCACGTGAT--
 A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C A C T G A G T C
A C G T A C G T A C G T A C G T T C A G C G A T A T G C C T G A A T G C T A C G G A C T A C T G C G T A A G C T A C G T A C G T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:10
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:GCAGGTCACGTGACGC
----GTCACGTGAT--
 A C T G A G T C C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A C G T A C T G C G T A A G T C A C T G A G T C
A C G T A C G T A C G T A C G T T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T A C G T A C G T