Information for 18-GCATGGCAGGTCG (Motif 25)

A T C G T A G C G T C A C A G T C A T G A T C G A T G C C G T A C T A G A T C G A C G T A T G C C A T G
Reverse Opposite:
G T A C T A C G T G C A T A G C G A T C C G A T T A C G T A G C G T A C G T C A C A G T A T C G A T G C
p-value:1e-9
log p-value:-2.120e+01
Information Content per bp:1.554
Number of Target Sequences with motif117.0
Percentage of Target Sequences with motif14.16%
Number of Background Sequences with motif3745.9
Percentage of Background Sequences with motif7.86%
Average Position of motif in Targets50.9 +/- 25.6bp
Average Position of motif in Background49.5 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GCATGGCAGGTCG--
---SDGCAGGTGCNS
 A T C G T A G C G T C A C A G T C A T G A T C G A T G C C G T A C T A G A T C G A C G T A T G C C A T G A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GCATGGCAGGTCG
----AACAGGTGT
 A T C G T A G C G T C A C A G T C A T G A T C G A T G C C G T A C T A G A T C G A C G T A T G C C A T G
A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GCATGGCAGGTCG-
----NNCAGGTGNN
 A T C G T A G C G T C A C A G T C A T G A T C G A T G C C G T A C T A G A T C G A C G T A T G C C A T G A C G T
A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCATGGCAGGTCG---
NNNTGGCAGTTGGTNN
 A T C G T A G C G T C A C A G T C A T G A T C G A T G C C G T A C T A G A T C G A C G T A T G C C A T G A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GCATGGCAGGTCG--
-----VCAGGTRDRY
 A T C G T A G C G T C A C A G T C A T G A T C G A T G C C G T A C T A G A T C G A C G T A T G C C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

ID4/MA0824.1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GCATGGCAGGTCG-
----GACAGGTGTN
 A T C G T A G C G T C A C A G T C A T G A T C G A T G C C G T A C T A G A T C G A C G T A T G C C A T G A C G T
A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCATGGCAGGTCG
--AAGGCAAGTGT
 A T C G T A G C G T C A C A G T C A T G A T C G A T G C C G T A C T A G A T C G A C G T A T G C C A T G
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCATGGCAGGTCG
-CACAGCAGGGGG
 A T C G T A G C G T C A C A G T C A T G A T C G A T G C C G T A C T A G A T C G A C G T A T G C C A T G
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCATGGCAGGTCG---
-CACGGCAGTTGGTNN
 A T C G T A G C G T C A C A G T C A T G A T C G A T G C C G T A C T A G A T C G A C G T A T G C C A T G A C G T A C G T A C G T
A C G T T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCATGGCAGGTCG
-CTTGGCAA----
 A T C G T A G C G T C A C A G T C A T G A T C G A T G C C G T A C T A G A T C G A C G T A T G C C A T G
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T