Information for 8-VYAAATATTTDBW (Motif 11)

T C A G G A C T T G C A C T G A C G T A A C G T C G T A A C G T G A C T A C G T C T G A A G C T G C A T
Reverse Opposite:
C G T A T C G A G A C T G T C A C T G A C G T A A C G T C G T A C G A T G A C T A C G T C T G A A G T C
p-value:1e-16
log p-value:-3.731e+01
Information Content per bp:1.664
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif288.4
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets50.2 +/- 26.8bp
Average Position of motif in Background50.9 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:forward strand
Alignment:VYAAATATTTDBW--
-CTAATATTGCTAAA
 T C A G G A C T T G C A C T G A C G T A A C G T C G T A A C G T G A C T A C G T C T G A A G C T G C A T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.79
Offset:1
Orientation:forward strand
Alignment:VYAAATATTTDBW--
-CTAATATTGCTAAA
 T C A G G A C T T G C A C T G A C G T A A C G T C G T A A C G T G A C T A C G T C T G A A G C T G C A T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

FOXC1/MA0032.2/Jaspar

Match Rank:3
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:VYAAATATTTDBW--
----ATATTTACATA
 T C A G G A C T T G C A C T G A C G T A A C G T C G T A A C G T G A C T A C G T C T G A A G C T G C A T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

FOXB1/MA0845.1/Jaspar

Match Rank:4
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:VYAAATATTTDBW--
----ATATTTACATA
 T C A G G A C T T G C A C T G A C G T A A C G T C G T A A C G T G A C T A C G T C T G A A G C T G C A T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:VYAAATATTTDBW
--AATTATT----
 T C A G G A C T T G C A C T G A C G T A A C G T C G T A A C G T G A C T A C G T C T G A A G C T G C A T
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--VYAAATATTTDBW--
NNNCTGATATCTCNNNN
 A C G T A C G T T C A G G A C T T G C A C T G A C G T A A C G T C G T A A C G T G A C T A C G T C T G A A G C T G C A T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.64
Offset:5
Orientation:forward strand
Alignment:VYAAATATTTDBW--
-----TRTTTACTTW
 T C A G G A C T T G C A C T G A C G T A A C G T C G T A A C G T G A C T A C G T C T G A A G C T G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:VYAAATATTTDBW-
--GAATGTTTGTTT
 T C A G G A C T T G C A C T G A C G T A A C G T C G T A A C G T G A C T A C G T C T G A A G C T G C A T A C G T
A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:VYAAATATTTDBW
--GAATATTCAT-
 T C A G G A C T T G C A C T G A C G T A A C G T C G T A A C G T G A C T A C G T C T G A A G C T G C A T
A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.63
Offset:5
Orientation:forward strand
Alignment:VYAAATATTTDBW-
-----TGTTTATTT
 T C A G G A C T T G C A C T G A C G T A A C G T C G T A A C G T G A C T A C G T C T G A A G C T G C A T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T