Information for 2-TTCAGCACCMTGGMCA (Motif 8)

A C G T A G C T A G T C C G T A C T A G A T G C C G T A A T G C A G T C G T A C C G A T A C T G C T A G G T C A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C A G T C G C T A C A T G A C T G A T C G A C G T A T C G A G T C G A C T A C T G C T G A G T C A
p-value:1e-11
log p-value:-2.749e+01
Information Content per bp:1.807
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 17.9bp
Average Position of motif in Background61.4 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.83
Offset:0
Orientation:forward strand
Alignment:TTCAGCACCMTGGMCA-----
TTCAGCACCATGGACAGCGCC
 A C G T A G C T A G T C C G T A C T A G A T G C C G T A A T G C A G T C G T A C C G A T A C T G C T A G G T C A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:TTCAGCACCMTGGMCA-----
-TCAGCACCATGGACAGCTCC
 A C G T A G C T A G T C C G T A C T A G A T G C C G T A A T G C A G T C G T A C C G A T A C T G C T A G G T C A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.54
Offset:8
Orientation:forward strand
Alignment:TTCAGCACCMTGGMCA--
--------CAAGGHCANV
 A C G T A G C T A G T C C G T A C T A G A T G C C G T A A T G C A G T C G T A C C G A T A C T G C T A G G T C A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.51
Offset:7
Orientation:forward strand
Alignment:TTCAGCACCMTGGMCA-
-------CCAGGAACAG
 A C G T A G C T A G T C C G T A C T A G A T G C C G T A A T G C A G T C G T A C C G A T A C T G C T A G G T C A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.50
Offset:6
Orientation:forward strand
Alignment:TTCAGCACCMTGGMCA
------BTCAAGGTCA
 A C G T A G C T A G T C C G T A C T A G A T G C C G T A A T G C A G T C G T A C C G A T A C T G C T A G G T C A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.49
Offset:6
Orientation:forward strand
Alignment:TTCAGCACCMTGGMCA
------NTCAAGGTCA
 A C G T A G C T A G T C C G T A C T A G A T G C C G T A A T G C A G T C G T A C C G A T A C T G C T A G G T C A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.49
Offset:7
Orientation:forward strand
Alignment:TTCAGCACCMTGGMCA-
-------CAAAGGTCAG
 A C G T A G C T A G T C C G T A C T A G A T G C C G T A A T G C A G T C G T A C C G A T A C T G C T A G G T C A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---TTCAGCACCMTGGMCA
SCTGTCARCACC-------
 A C G T A C G T A C G T A C G T A G C T A G T C C G T A C T A G A T G C C G T A A T G C A G T C G T A C C G A T A C T G C T A G G T C A A G T C C G T A
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.47
Offset:6
Orientation:forward strand
Alignment:TTCAGCACCMTGGMCA
------WDNCTGGGCA
 A C G T A G C T A G T C C G T A C T A G A T G C C G T A A T G C A G T C G T A C C G A T A C T G C T A G G T C A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.47
Offset:3
Orientation:forward strand
Alignment:TTCAGCACCMTGGMCA--
---AAGTTCAAGGTCAGC
 A C G T A G C T A G T C C G T A C T A G A T G C C G T A A T G C A G T C G T A C C G A T A C T G C T A G G T C A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C