Information for 3-TDCCATATATGGN (Motif 2)

A C G T C G A T G T A C A G T C C G T A C G A T C G T A C G A T C G T A C G A T C T A G A C T G T C G A
Reverse Opposite:
A G C T A G T C A G T C C G T A G C A T C G T A C G A T G C T A G C A T A C T G A C T G G C T A T G C A
p-value:1e-45
log p-value:-1.052e+02
Information Content per bp:1.674
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif6.04%
Number of Background Sequences with motif155.3
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets51.8 +/- 17.6bp
Average Position of motif in Background49.3 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:TDCCATATATGGN
TNCCATATATGG-
 A C G T C G A T G T A C A G T C C G T A C G A T C G T A C G A T C G T A C G A T C T A G A C T G T C G A
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:2
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:TDCCATATATGGN-
TNCCATATATGGNA
 A C G T C G A T G T A C A G T C C G T A C G A T C G T A C G A T C G T A C G A T C T A G A C T G T C G A A C G T
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

MF0008.1_MADS_class/Jaspar

Match Rank:3
Score:0.92
Offset:2
Orientation:reverse strand
Alignment:TDCCATATATGGN
--CCATATATGG-
 A C G T C G A T G T A C A G T C C G T A C G A T C G T A C G A T C G T A C G A T C T A G A C T G T C G A
A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T

SRF/MA0083.3/Jaspar

Match Rank:4
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-TDCCATATATGGN--
TGACCATATATGGTCA
 A C G T A C G T C G A T G T A C A G T C C G T A C G A T C G T A C G A T C G T A C G A T C T A G A C T G T C G A A C G T A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TDCCATATATGGN-
--CCTTTTATAGNC
 A C G T C G A T G T A C A G T C C G T A C G A T C G T A C G A T C G T A C G A T C T A G A C T G T C G A A C G T
A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TDCCATATATGGN
-KCCAAAAATAGC
 A C G T C G A T G T A C A G T C C G T A C G A T C G T A C G A T C G T A C G A T C T A G A C T G T C G A
A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

PB0184.1_Tbp_2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TDCCATATATGGN
GNNCGCTTAAATCGG
 A C G T A C G T A C G T C G A T G T A C A G T C C G T A C G A T C G T A C G A T C G T A C G A T C T A G A C T G T C G A
C A T G T A C G C A G T G T A C A T C G T A G C C G A T C A G T C G T A C G T A C T G A G C A T A T G C T A C G A C T G

HLTF/MA0109.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TDCCATATATGGN
AACCTTATAT---
 A C G T C G A T G T A C A G T C C G T A C G A T C G T A C G A T C G T A C G A T C T A G A C T G T C G A
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TDCCATATATGGN
-ACCATATGTT--
 A C G T C G A T G T A C A G T C C G T A C G A T C G T A C G A T C G T A C G A T C T A G A C T G T C G A
A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TDCCATATATGGN
--CCATATGT---
 A C G T C G A T G T A C A G T C C G T A C G A T C G T A C G A T C G T A C G A T C T A G A C T G T C G A
A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T