Information for 9-GCGGCCAGTTTTG (Motif 11)

A T C G G T A C A C T G A C T G A T G C T G A C C G T A C T A G A G C T A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A C T G A A G T C A C G T A C T G A T C G A G T C A G T C A C T G A T G C
p-value:1e-10
log p-value:-2.501e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.6 +/- 32.2bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCGGCCAGTTTTG
GCNGCCATCTTG-
 A T C G G T A C A C T G A C T G A T G C T G A C C G T A C T A G A G C T A C G T A C G T A C G T A C T G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCGGCCAGTTTTG
GCCGCCATCTTG-
 A T C G G T A C A C T G A C T G A T G C T G A C C G T A C T A G A G C T A C G T A C G T A C G T A C T G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCGGCCAGTTTTG
AAGGCAAGTGT--
 A T C G G T A C A C T G A C T G A T G C T G A C C G T A C T A G A G C T A C G T A C G T A C G T A C T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCGGCCAGTTTTG
TNNGGGCAG-----
 A C G T A T C G G T A C A C T G A C T G A T G C T G A C C G T A C T A G A G C T A C G T A C G T A C G T A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCGGCCAGTTTTG--
CCTTGCAATTTTTNN
 A T C G G T A C A C T G A C T G A T G C T G A C C G T A C T A G A G C T A C G T A C G T A C G T A C T G A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCGGCCAGTTTTG
GGCGGGAAAH----
 A C G T A T C G G T A C A C T G A C T G A T G C T G A C C G T A C T A G A G C T A C G T A C G T A C G T A C T G
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GCGGCCAGTTTTG
----CAAGCTT--
 A T C G G T A C A C T G A C T G A T G C T G A C C G T A C T A G A G C T A C G T A C G T A C G T A C T G
A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GCGGCCAGTTTTG
CWGGCGGGAA------
 A C G T A C G T A C G T A T C G G T A C A C T G A C T G A T G C T G A C C G T A C T A G A G C T A C G T A C G T A C G T A C T G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GCGGCCAGTTTTG-
----CCATATATGG
 A T C G G T A C A C T G A C T G A T G C T G A C C G T A C T A G A G C T A C G T A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:GCGGCCAGTTTTG----
-------CCTTTGATGT
 A T C G G T A C A C T G A C T G A T G C T G A C C G T A C T A G A G C T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T