Information for 6-GRYTTCAGGCAGA (Motif 9)

A C T G C T A G A G T C A C G T C G A T A G T C C G T A C T A G A C T G A T G C C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C A C G T A T C G A G T C A G T C C G A T A C T G C G T A C G T A C T A G A G T C G T A C
p-value:1e-8
log p-value:-2.069e+01
Information Content per bp:1.826
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif19.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.4 +/- 21.4bp
Average Position of motif in Background56.6 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GRYTTCAGGCAGA
---TNNGGGCAG-
 A C T G C T A G A G T C A C G T C G A T A G T C C G T A C T A G A C T G A T G C C G T A A C T G C T G A
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

ELK4/MA0076.2/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GRYTTCAGGCAGA
CCACTTCCGGC---
 A C G T A C T G C T A G A G T C A C G T C G A T A G T C C G T A C T A G A C T G A T G C C G T A A C T G C T G A
A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GRYTTCAGGCAGA
TGGTTTCAGT----
 A C G T A C T G C T A G A G T C A C G T C G A T A G T C C G T A C T A G A C T G A T G C C G T A A C T G C T G A
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GRYTTCAGGCAGA-
RGSMTBCTGGGAAAT
 A C G T A C T G C T A G A G T C A C G T C G A T A G T C C G T A C T A G A C T G A T G C C G T A A C T G C T G A A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

STAT1/MA0137.3/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GRYTTCAGGCAGA
--TTTCCAGGAAA
 A C T G C T A G A G T C A C G T C G A T A G T C C G T A C T A G A C T G A T G C C G T A A C T G C T G A
A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

STAT3/MA0144.2/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GRYTTCAGGCAGA
--CTTCTGGGAAA
 A C T G C T A G A G T C A C G T C G A T A G T C C G T A C T A G A C T G A T G C C G T A A C T G C T G A
A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GRYTTCAGGCAGA
--TTCCNGGAAG-
 A C T G C T A G A G T C A C G T C G A T A G T C C G T A C T A G A C T G A T G C C G T A A C T G C T G A
A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GRYTTCAGGCAGA
HACTTCCGGY---
 A C T G C T A G A G T C A C G T C G A T A G T C C G T A C T A G A C T G A T G C C G T A A C T G C T G A
G A T C T C G A A G T C C G A T C G A T A G T C A T G C A C T G A T C G G A C T A C G T A C G T A C G T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GRYTTCAGGCAGA
-ACTTCCGGNT--
 A C T G C T A G A G T C A C G T C G A T A G T C C G T A C T A G A C T G A T G C C G T A A C T G C T G A
A C G T C T G A A G T C C G A T G A C T A G T C A T G C A C T G A T C G A C G T G A C T A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GRYTTCAGGCAGA
NCCACTTCCGG----
 A C G T A C G T A C T G C T A G A G T C A C G T C G A T A G T C C G T A C T A G A C T G A T G C C G T A A C T G C T G A
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T A C G T A C G T