Information for 6-ATVTGGTDCAGGTCTC (Motif 9)

C G T A A C G T T A C G A C G T C A T G A C T G G A C T C A G T A T G C C G T A A C T G A C T G A C G T A G T C A C G T G T A C
Reverse Opposite:
A C T G C G T A A C T G G T C A A G T C G T A C C G A T A T C G G A C T C T G A A G T C G T A C C G T A A G T C C G T A A C G T
p-value:1e-11
log p-value:-2.633e+01
Information Content per bp:1.790
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.6 +/- 24.2bp
Average Position of motif in Background61.5 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OLIG3/MA0827.1/Jaspar

Match Rank:1
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---ATVTGGTDCAGGTCTC
ANCATATGGT---------
 A C G T A C G T A C G T C G T A A C G T T A C G A C G T C A T G A C T G G A C T C A G T A T G C C G T A A C T G A C T G A C G T A G T C A C G T G T A C
C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:2
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---ATVTGGTDCAGGTCTC
ACCATATGGT---------
 A C G T A C G T A C G T C G T A A C G T T A C G A C G T C A T G A C T G G A C T C A G T A T G C C G T A A C T G A C T G A C G T A G T C A C G T G T A C
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:ATVTGGTDCAGGTCTC
-------CNAGGCCT-
 C G T A A C G T T A C G A C G T C A T G A C T G G A C T C A G T A T G C C G T A A C T G A C T G A C G T A G T C A C G T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

OLIG2/MA0678.1/Jaspar

Match Rank:4
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---ATVTGGTDCAGGTCTC
ACCATATGGT---------
 A C G T A C G T A C G T C G T A A C G T T A C G A C G T C A T G A C T G G A C T C A G T A T G C C G T A A C T G A C T G A C G T A G T C A C G T G T A C
C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--ATVTGGTDCAGGTCTC
NNHTGTGGTTWN------
 A C G T A C G T C G T A A C G T T A C G A C G T C A T G A C T G G A C T C A G T A T G C C G T A A C T G A C T G A C G T A G T C A C G T G T A C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.50
Offset:9
Orientation:forward strand
Alignment:ATVTGGTDCAGGTCTC-----
---------AGGTCTCTAACC
 C G T A A C G T T A C G A C G T C A T G A C T G G A C T C A G T A T G C C G T A A C T G A C T G A C G T A G T C A C G T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---ATVTGGTDCAGGTCTC
NACATATGGN---------
 A C G T A C G T A C G T C G T A A C G T T A C G A C G T C A T G A C T G G A C T C A G T A T G C C G T A A C T G A C T G A C G T A G T C A C G T G T A C
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.49
Offset:9
Orientation:forward strand
Alignment:ATVTGGTDCAGGTCTC-
---------AGGCCTAG
 C G T A A C G T T A C G A C G T C A T G A C T G G A C T C A G T A T G C C G T A A C T G A C T G A C G T A G T C A C G T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Bhlha15/MA0607.1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--ATVTGGTDCAGGTCTC
ACATATGG----------
 A C G T A C G T C G T A A C G T T A C G A C G T C A T G A C T G G A C T C A G T A T G C C G T A A C T G A C T G A C G T A G T C A C G T G T A C
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:10
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---ATVTGGTDCAGGTCTC
ANCATATGTT---------
 A C G T A C G T A C G T C G T A A C G T T A C G A C G T C A T G A C T G G A C T C A G T A T G C C G T A A C T G A C T G A C G T A G T C A C G T G T A C
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T