Information for 12-TGTCACACTA (Motif 34)

A C G T A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A A G T C C G T A
p-value:1e-4
log p-value:-1.059e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.5 +/- 14.6bp
Average Position of motif in Background55.3 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS3/MA0775.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGTCACACTA
CCTGTCAA----
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C G T C G T A
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGTCACACTA
KTTCACACCT
 A C G T A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C G T C G T A
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGTCACACTA
NTGTCAN----
 A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C G T C G T A
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGTCACACTA-
-ATCACCCCAT
 A C G T A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C G T C G T A A C G T
A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

MGA/MA0801.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGTCACACTA
--TCACACCT
 A C G T A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C G T C G T A
A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGTCACACTA-
CNGTCACGCCAC
 A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C G T C G T A A C G T
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGTCACACTA-
NTTTTCACACCTT
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C G T C G T A A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGTCACACTA
--TCACACCT
 A C G T A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C G T C G T A
A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGTCACACTA----
NNTTTTCACACCTTNNN
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGTCACACTA-
-ATCACCCCAT
 A C G T A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C G T C G T A A C G T
A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T