p-value: | 1e-10 |
log p-value: | -2.487e+01 |
Information Content per bp: | 1.695 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 1.44% |
Number of Background Sequences with motif | 20.0 |
Percentage of Background Sequences with motif | 0.04% |
Average Position of motif in Targets | 52.6 +/- 25.6bp |
Average Position of motif in Background | 50.7 +/- 16.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AWGCACACAGTGTGGC --TCAGNGAGCGTGAC |
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ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 2 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AWGCACACAGTGTGGC NAGAACAGNCTGTNCT |
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GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer
Match Rank: | 3 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AWGCACACAGTGTGGC NAGNACANNNTGTNCT |
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PB0208.1_Zscan4_2/Jaspar
Match Rank: | 4 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AWGCACACAGTGTGGC CGAAGCACACAAAATA-- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 5 |
Score: | 0.52 |
Offset: | 10 |
Orientation: | reverse strand |
Alignment: | AWGCACACAGTGTGGC--- ----------NTTGGCANN |
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PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer
Match Rank: | 6 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AWGCACACAGTGTGGC VAGRACAKNCTGTBC- |
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Ar/MA0007.3/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AWGCACACAGTGTGGC- NGGTACACNGTGTTCCC |
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NFIC/MA0161.1/Jaspar
Match Rank: | 8 |
Score: | 0.51 |
Offset: | 11 |
Orientation: | forward strand |
Alignment: | AWGCACACAGTGTGGC- -----------TTGGCA |
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PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer
Match Rank: | 9 |
Score: | 0.50 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AWGCACACAGTGTGGC AAGAACATWHTGTTC- |
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GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AWGCACACAGTGTGGC VAGRACAKWCTGTYC- |
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