Information for 7-CAAGRCARKTTGWGRK (Motif 10)

A G T C G T C A C T G A A C T G C T A G A G T C C G T A C T A G A C T G A G C T A C G T A C T G C G T A A C T G C T A G A C G T
Reverse Opposite:
T G C A A G T C A G T C C G A T A G T C C G T A C T G A G T A C A G T C A C G T A C T G A G T C A G T C A G C T A C G T A C T G
p-value:1e-11
log p-value:-2.633e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 28.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAAGRCARKTTGWGRK
-AAGGCAAGTGT----
 A G T C G T C A C T G A A C T G C T A G A G T C C G T A C T A G A C T G A G C T A C G T A C T G C G T A A C T G C T A G A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAAGRCARKTTGWGRK
CACGGCAGTTGGTNN-
 A G T C G T C A C T G A A C T G C T A G A G T C C G T A C T A G A C T G A G C T A C G T A C T G C G T A A C T G C T A G A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAAGRCARKTTGWGRK
NNNTGGCAGTTGGTNN-
 A C G T A G T C G T C A C T G A A C T G C T A G A G T C C G T A C T A G A C T G A G C T A C G T A C T G C G T A A C T G C T A G A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T

Myb/MA0100.2/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAAGRCARKTTGWGRK
--TGGCAGTTGN----
 A G T C G T C A C T G A A C T G C T A G A G T C C G T A C T A G A C T G A G C T A C G T A C T G C G T A A C T G C T A G A C G T
A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAAGRCARKTTGWGRK
----ACAGGATGTGGT
 A G T C G T C A C T G A A C T G C T A G A G T C C G T A C T A G A C T G A G C T A C G T A C T G C G T A A C T G C T A G A C G T
A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CAAGRCARKTTGWGRK
--TGGCAGTTGG----
 A G T C G T C A C T G A A C T G C T A G A G T C C G T A C T A G A C T G A G C T A C G T A C T G C G T A A C T G C T A G A C G T
A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CAAGRCARKTTGWGRK
CCAGACAG--------
 A G T C G T C A C T G A A C T G C T A G A G T C C G T A C T A G A C T G A G C T A C G T A C T G C G T A A C T G C T A G A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CAAGRCARKTTGWGRK---
-------NNHTGTGGTTWN
 A G T C G T C A C T G A A C T G C T A G A G T C C G T A C T A G A C T G A G C T A C G T A C T G C G T A A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:CAAGRCARKTTGWGRK--
--------TTTGCGGTTT
 A G T C G T C A C T G A A C T G C T A G A G T C C G T A C T A G A C T G A G C T A C G T A C T G C G T A A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CAAGRCARKTTGWGRK
AAAAGTCAA--------
 A C G T A G T C G T C A C T G A A C T G C T A G A G T C C G T A C T A G A C T G A G C T A C G T A C T G C G T A A C T G C T A G A C G T
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T