Information for 6-CACCAGGTGGTGCCAT (Motif 4)

A G T C G T C A T G A C G T A C C G T A C T A G A T C G A C G T A C T G A C T G C G A T A C T G G T A C A T G C C G T A A C G T
Reverse Opposite:
G T C A A C G T A T C G A C T G A G T C G C T A A G T C A G T C C G T A A T G C A G T C C G A T A C T G A C T G C A G T A C T G
p-value:1e-15
log p-value:-3.471e+01
Information Content per bp:1.841
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.3 +/- 6.2bp
Average Position of motif in Background42.5 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACCAGGTGGTGCCAT--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C G T C A T G A C G T A C C G T A C T A G A T C G A C G T A C T G A C T G C G A T A C T G G T A C A T G C C G T A A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CACCAGGTGGTGCCAT
TGGCCACCAGGGGGCGCTA-
 A C G T A C G T A C G T A C G T A G T C G T C A T G A C G T A C C G T A C T A G A T C G A C G T A C T G A C T G C G A T A C T G G T A C A T G C C G T A A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CACCAGGTGGTGCCAT
-AACAGGTGNT-----
 A G T C G T C A T G A C G T A C C G T A C T A G A T C G A C G T A C T G A C T G C G A T A C T G G T A C A T G C C G T A A C G T
A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CACCAGGTGGTGCCAT
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C G T C A T G A C G T A C C G T A C T A G A T C G A C G T A C T G A C T G C G A T A C T G G T A C A T G C C G T A A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CACCAGGTGGTGCCAT
GAGCAACAGGTGGTT----
 A C G T A C G T A C G T A G T C G T C A T G A C G T A C C G T A C T A G A T C G A C G T A C T G A C T G C G A T A C T G G T A C A T G C C G T A A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CACCAGGTGGTGCCAT
ATGCAACAGGTGG------
 A C G T A C G T A C G T A G T C G T C A T G A C G T A C C G T A C T A G A T C G A C G T A C T G A C T G C G A T A C T G G T A C A T G C C G T A A C G T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CACCAGGTGGTGCCAT----
---TNNNNGGTGTCATNTNT
 A G T C G T C A T G A C G T A C C G T A C T A G A T C G A C G T A C T G A C T G C G A T A C T G G T A C A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CACCAGGTGGTGCCAT
------GTGGAT----
 A G T C G T C A T G A C G T A C C G T A C T A G A T C G A C G T A C T G A C T G C G A T A C T G G T A C A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CACCAGGTGGTGCCAT---
--NNNNTTGGCGCCGANNN
 A G T C G T C A T G A C G T A C C G T A C T A G A T C G A C G T A C T G A C T G C G A T A C T G G T A C A T G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CACCAGGTGGTGCCAT---
--NNNNTTGGCGCCGANNN
 A G T C G T C A T G A C G T A C C G T A C T A G A T C G A C G T A C T G A C T G C G A T A C T G G T A C A T G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G