Information for 8-TCTGGTGCCA (Motif 8)

A C G T A G T C A C G T A C T G A T C G A C G T A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G C T A G A G T C C G T A T A G C A G T C C G T A A C T G C G T A
p-value:1e-10
log p-value:-2.375e+01
Information Content per bp:1.932
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif113.9
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets44.4 +/- 28.3bp
Average Position of motif in Background47.6 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TCTGGTGCCA--
---CGTGCCAAG
 A C G T A G T C A C G T A C T G A T C G A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TCTGGTGCCA---
---GGTGCCAAGT
 A C G T A G T C A C G T A C T G A T C G A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TCTGGTGCCA--
----TTGCCAAG
 A C G T A G T C A C G T A C T G A T C G A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TCTGGTGCCA---
----ATGCCAACC
 A C G T A G T C A C G T A C T G A T C G A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TCTGGTGCCA-
-----TGCCAA
 A C G T A G T C A C G T A C T G A T C G A C G T A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

E2F1/MA0024.3/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCTGGTGCCA--
TTTGGCGCCAAA
 A C G T A G T C A C G T A C T G A T C G A C G T A C T G A G T C A G T C C G T A A C G T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCTGGTGCCA---
-CTGTTGCTAGGS
 A C G T A G T C A C G T A C T G A T C G A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCTGGTGCCA--
GGTGYTGACAGS
 A C G T A G T C A C G T A C T G A T C G A C G T A C T G A G T C A G T C C G T A A C G T A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TCTGGTGCCA---
-----TGTCANYT
 A C G T A G T C A C G T A C T G A T C G A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCTGGTGCCA
--AGGTGTCA
 A C G T A G T C A C G T A C T G A T C G A C G T A C T G A G T C A G T C C G T A
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A