Information for 6-CYCCTSTGTAGGKAGC (Motif 7)

A G T C G A T C A G T C A G T C C G A T A T G C A C G T A C T G C G A T C G T A C T A G A C T G C A T G G T C A C T A G A G T C
Reverse Opposite:
A C T G A G T C A C G T G T A C G T A C A G T C A C G T G C T A A G T C C G T A A T C G C G T A C T A G A C T G C T A G A C T G
p-value:1e-11
log p-value:-2.561e+01
Information Content per bp:1.749
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.1 +/- 17.0bp
Average Position of motif in Background45.1 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0155.1_Osr2_2/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CYCCTSTGTAGGKAGC----
----NNTGTAGGTAGCANNT
 A G T C G A T C A G T C A G T C C G A T A T G C A C G T A C T G C G A T C G T A C T A G A C T G C A T G G T C A C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CYCCTSTGTAGGKAGC----
----NNNTTAGGTAGCNTNT
 A G T C G A T C A G T C A G T C C G A T A T G C A C G T A C T G C G A T C G T A C T A G A C T G C A T G G T C A C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CYCCTSTGTAGGKAGC
--CCTTTGTT------
 A G T C G A T C A G T C A G T C C G A T A T G C A C G T A C T G C G A T C G T A C T A G A C T G C A T G G T C A C T A G A G T C
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CYCCTSTGTAGGKAGC
--CCWTTGTY------
 A G T C G A T C A G T C A G T C C G A T A T G C A C G T A C T G C G A T C G T A C T A G A C T G C A T G G T C A C T A G A G T C
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CYCCTSTGTAGGKAGC
AGGVNCCTTTGT-------
 A C G T A C G T A C G T A G T C G A T C A G T C A G T C C G A T A T G C A C G T A C T G C G A T C G T A C T A G A C T G C A T G G T C A C T A G A G T C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CYCCTSTGTAGGKAGC
ACCATCTGTT------
 A G T C G A T C A G T C A G T C C G A T A T G C A C G T A C T G C G A T C G T A C T A G A C T G C A T G G T C A C T A G A G T C
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.49
Offset:10
Orientation:reverse strand
Alignment:CYCCTSTGTAGGKAGC
----------CGGAGC
 A G T C G A T C A G T C A G T C C G A T A T G C A C G T A C T G C G A T C G T A C T A G A C T G C A T G G T C A C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CYCCTSTGTAGGKAGC
---CTTTGT-------
 A G T C G A T C A G T C A G T C C G A T A T G C A C G T A C T G C G A T C G T A C T A G A C T G C A T G G T C A C T A G A G T C
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.47
Offset:2
Orientation:forward strand
Alignment:CYCCTSTGTAGGKAGC
--CCWTTGTYYB----
 A G T C G A T C A G T C A G T C C G A T A T G C A C G T A C T G C G A T C G T A C T A G A C T G C A T G G T C A C T A G A G T C
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:CYCCTSTGTAGGKAGC
---NNHTGTGGTTWN-
 A G T C G A T C A G T C A G T C C G A T A T G C A C G T A C T G C G A T C G T A C T A G A C T G C A T G G T C A C T A G A G T C
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T