Information for 10-CCAATTGGTG (Motif 11)

A G T C A G T C C T G A G T C A A C G T A C G T A C T G A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G T C G T C A C G T A A C G T A G C T A C T G A C T G
p-value:1e-7
log p-value:-1.803e+01
Information Content per bp:1.925
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif74.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets48.6 +/- 21.6bp
Average Position of motif in Background49.8 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0109.1_Nkx1-1/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CCAATTGGTG---
TGCGCTAATTAGTGGGA
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A G T C A A C G T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A C G T
C G A T T A C G G T A C T C A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T C A T G T A C G A C T G T C G A

PH0089.1_Isx/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CCAATTGGTG--
ACTCCTAATTAGTCGT
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A G T C A A C G T A C G T A C T G A C T G A C G T A C T G A C G T A C G T
G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CCAATTGGTG
AGCCAATCGG--
 A C G T A C G T A G T C A G T C C T G A G T C A A C G T A C G T A C T G A C T G A C G T A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

PH0033.1_Gbx1/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CCAATTGGTG--
TGCCACTAATTAGTGTA
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A G T C A A C G T A C G T A C T G A C T G A C G T A C T G A C G T A C G T
G C A T C T A G A T G C T G A C T C G A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A C G T A C T G A C G T G C T A

PH0034.1_Gbx2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCAATTGGTG---
AGCGCTAATTAGCGATT
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A G T C A A C G T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A C G T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

PH0107.1_Msx2/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCAATTGGTG---
ANCGCTAATTGGTCTNN
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A G T C A A C G T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A C G T
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------CCAATTGGTG
AAATGGACCAATCAG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A G T C A A C G T A C G T A C T G A C T G A C G T A C T G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T

PH0029.1_En2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCAATTGGTG---
TGCACTAATTAGTGGAA
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A G T C A A C G T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A C G T
C G A T T C A G G T A C T G C A G A T C G A C T G C T A C G T A C G A T C A G T C T G A C T A G A G C T A T C G T C A G G C T A G C A T

PH0007.1_Barx1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCAATTGGTG---
AAAGTAATTAGTGAAT
 A C G T A C G T A C G T A G T C A G T C C T G A G T C A A C G T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A C G T
G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

PH0110.1_Nkx1-2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCAATTGGTG---
TGNACTAATTAGTGNAN
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A G T C A A C G T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A C G T
C G A T T A C G G A T C T G C A G A T C G A C T G T C A C G T A C G A T A C G T C T G A C T A G A G C T A C T G T G A C G T C A G T A C