Information for 10-TTAATAGTGC (Motif 13)

A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C G T C G T A A C G T A C G T C G T A C G T A
p-value:1e-8
log p-value:-1.930e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.2 +/- 22.6bp
Average Position of motif in Background52.3 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0135.1_Hoxa3_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTAATAGTGC--
CCTTAATNGNTTTT
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

Nkx2-5/MA0063.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTAATAGTGC
TTAATTG---
 A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C T G A G T C
C G A T A G C T C G T A C G T A A C G T G C A T C A T G A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTAATAGTGC
TTTAAT-----
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C T G A G T C
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTAATAGTGC----
CTAATATTGCTAAA
 A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTAATAGTGC----
CTAATATTGCTAAA
 A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

BARX1/MA0875.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTAATAGTGC
NTAATTGN--
 A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C T G A G T C
A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTAATAGTGC
NTAATTAATAT---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C T G A G T C
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTAATAGTGC
TTAATTAN--
 A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C T G A G T C
C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G A C G T A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTAATAGTGC--
CTCATTAATTATGCAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTAATAGTGC
GKTAATGR---
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C G T A C T G A G T C
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T