Information for 15-GGTCTGGTAGCGC (Motif 16)

A C T G A C T G A C G T A G T C A C G T A C T G A C T G A G C T C G T A A C T G T A G C A C T G A G T C
Reverse Opposite:
A C T G A G T C A T C G A G T C A C G T C T G A A G T C A G T C C G T A C T A G C G T A A G T C A G T C
p-value:1e-8
log p-value:-1.957e+01
Information Content per bp:1.937
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.8 +/- 17.7bp
Average Position of motif in Background34.2 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGTCTGGTAGCGC
GGTCTGGCAT---
 A C T G A C T G A C G T A G T C A C G T A C T G A C T G A G C T C G T A A C T G T A G C A C T G A G T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGTCTGGTAGCGC--
NNNTTAGGTAGCNTNT
 A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C T G A G C T C G T A A C T G T A G C A C T G A G T C A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GGTCTGGTAGCGC
NNTNNTGTCTGGNNTNG-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C T G A G C T C G T A A C T G T A G C A C T G A G T C
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGTCTGGTAGCGC
CTGTCTGG------
 A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C T G A G C T C G T A A C T G T A G C A C T G A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGTCTGGTAGCGC
VBSYGTCTGG------
 A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C T G A G C T C G T A A C T G T A G C A C T G A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGTCTGGTAGCGC--
NNTGTAGGTAGCANNT
 A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C T G A G C T C G T A A C T G T A G C A C T G A G T C A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGTCTGGTAGCGC
NTGGGTGTGGCC----
 A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C T G A G C T C G T A A C T G T A G C A C T G A G T C
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGTCTGGTAGCGC
CAGTGTGGTCGC--
 A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C T G A G C T C G T A A C T G T A G C A C T G A G T C
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GGTCTGGTAGCGC
TGGGTGTGGC-----
 A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C T G A G C T C G T A A C T G T A G C A C T G A G T C
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GGTCTGGTAGCGC
TGGGTGTGGCN----
 A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C T G A G C T C G T A A C T G T A G C A C T G A G T C
C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C A C G T A C G T A C G T A C G T