Information for 9-AACTYTGTCMTTA (Motif 6)

C G T A C G T A G T A C A C G T A G C T A C G T A C T G A C G T A G T C G T C A A C G T A G C T C T G A
Reverse Opposite:
A G C T C T G A C G T A C A G T A C T G C G T A A G T C C G T A T C G A C G T A A C T G C G A T C G A T
p-value:1e-11
log p-value:-2.668e+01
Information Content per bp:1.842
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.2 +/- 27.8bp
Average Position of motif in Background37.7 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AACTYTGTCMTTA
----NTGTCAN--
 C G T A C G T A G T A C A C G T A G C T A C G T A C T G A C G T A G T C G T C A A C G T A G C T C T G A
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AACTYTGTCMTTA
--CTTTGT-----
 C G T A C G T A G T A C A C G T A G C T A C G T A C T G A C G T A G T C G T C A A C G T A G C T C T G A
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AACTYTGTCMTTA
TGGACTTTGNNCTCN
 A C G T A C G T C G T A C G T A G T A C A C G T A G C T A C G T A C T G A C G T A G T C G T C A A C G T A G C T C T G A
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AACTYTGTCMTTA-
TGGACTTTGNNCTNTG
 A C G T A C G T C G T A C G T A G T A C A C G T A G C T A C G T A C T G A C G T A G T C G T C A A C G T A G C T C T G A A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AACTYTGTCMTTA
----YTGWCADY-
 C G T A C G T A G T A C A C G T A G C T A C G T A C T G A C G T A G T C G T C A A C G T A G C T C T G A
A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AACTYTGTCMTTA
TGACCTTTGACCTC-
 A C G T A C G T C G T A C G T A G T A C A C G T A G C T A C G T A C T G A C G T A G T C G T C A A C G T A G C T C T G A
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AACTYTGTCMTTA
-CCTTTGTTTT--
 C G T A C G T A G T A C A C G T A G C T A C G T A C T G A C G T A G T C G T C A A C G T A G C T C T G A
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AACTYTGTCMTTA
-----TGACCTYA
 C G T A C G T A G T A C A C G T A G C T A C G T A C T G A C G T A G T C G T C A A C G T A G C T C T G A
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PB0032.1_IRC900814_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AACTYTGTCMTTA--
GNNATTTGTCGTAANN
 A C G T C G T A C G T A G T A C A C G T A G C T A C G T A C T G A C G T A G T C G T C A A C G T A G C T C T G A A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AACTYTGTCMTTA
AAYTAGGTCA---
 C G T A C G T A G T A C A C G T A G C T A C G T A C T G A C G T A G T C G T C A A C G T A G C T C T G A
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T