Information for 8-GGAGAGGTCG (Motif 17)

A C T G A C T G C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A G T C A G T C A C G T A G T C A C G T A G T C A G T C
p-value:1e-7
log p-value:-1.658e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 23.7bp
Average Position of motif in Background27.6 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGAGAGGTCG
--AGRGGTCA
 A C T G A C T G C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C T G
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGGTCG-----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

GLI2/MA0734.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAGAGGTCG-
CAGTGTGGTCGC
 A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C T G A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGAGAGGTCG
ANGNAAAGGTCA
 A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGGTCG----
TCTCAAAGGTCACGAG
 A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C T G A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGAGAGGTCG
--TRAGGTCA
 A C T G A C T G C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C T G
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGAGAGGTCG----
-CAAAGGTCAAGGG
 A C T G A C T G C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C T G A C G T A C G T A C G T A C G T
A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGGTCG----
TCTCAAAGGTCACCTG
 A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C T G A C G T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGAGGTCG-
NNAGGGGCGGGGTNNA
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C T G A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGAGAGGTCG
TTGAGTGSTT-
 A C G T A C T G A C T G C G T A A C T G C G T A A C T G A C T G A C G T A G T C A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T