Information for 11-AGAAAAGCTGTCT (Motif 12)

C G T A A T C G C G T A C T G A C T G A C T G A A C T G A G T C A C G T A C T G A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G T C C G T A A C T G A G T C A G C T A G C T A G C T A C G T A T G C A C G T
p-value:1e-9
log p-value:-2.154e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.4 +/- 24.7bp
Average Position of motif in Background61.7 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSC/MA0665.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGAAAAGCTGTCT
--AACAGCTGTT-
 C G T A A T C G C G T A C T G A C T G A C T G A A C T G A G T C A C G T A C T G A C G T A G T C A C G T
A C G T A C G T T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGAAAAGCTGTCT
-BAACAGCTGT--
 C G T A A T C G C G T A C T G A C T G A C T G A A C T G A G T C A C G T A C T G A C G T A G T C A C G T
A C G T A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T

MYF6/MA0667.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGAAAAGCTGTCT
--AACAGCTGTT-
 C G T A A T C G C G T A C T G A C T G A C T G A A C T G A G T C A C G T A C T G A C G T A G T C A C G T
A C G T A C G T T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGAAAAGCTGTCT-
GAAGAACAGGTGTCCG
 A C G T A C G T C G T A A T C G C G T A C T G A C T G A C T G A A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C G T
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

Tcf21/MA0832.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGAAAAGCTGTCT-
NCAACAGCTGTTGC
 C G T A A T C G C G T A C T G A C T G A C T G A A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C G T
T C G A A G T C C T G A T G C A A G T C C G T A T A C G G T A C A C G T A C T G A C G T G A C T C T A G A G T C

PH0170.1_Tgif2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGAAAAGCTGTCT----
-AACTAGCTGTCAATAC
 C G T A A T C G C G T A C T G A C T G A C T G A A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGAAAAGCTGTCT
--AACAGCTG---
 C G T A A T C G C G T A C T G A C T G A C T G A A C T G A G T C A C G T A C T G A C G T A G T C A C G T
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.61
Offset:7
Orientation:forward strand
Alignment:AGAAAAGCTGTCT--
-------CTGTCTGG
 C G T A A T C G C G T A C T G A C T G A C T G A A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGAAAAGCTGTCT
NNAGCAGCTGCT-
 C G T A A T C G C G T A C T G A C T G A C T G A A C T G A G T C A C G T A C T G A C G T A G T C A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.60
Offset:6
Orientation:forward strand
Alignment:AGAAAAGCTGTCT
------GCTGTG-
 C G T A A T C G C G T A C T G A C T G A C T G A A C T G A G T C A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T