Information for 5-CCTACWGTCG (Motif 5)

G T A C A G T C C G A T G T C A A G T C C G A T A C T G C G A T A T G C T A C G
Reverse Opposite:
A T G C T A C G C G T A A G T C C G T A A C T G A C G T C G T A C T A G A C T G
p-value:1e-12
log p-value:-2.957e+01
Information Content per bp:1.779
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.35%
Number of Background Sequences with motif126.8
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets47.5 +/- 26.1bp
Average Position of motif in Background50.7 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CCTACWGTCG--
CGACCAACTGCCGTG
 A C G T A C G T A C G T G T A C A G T C C G A T G T C A A G T C C G A T A C T G C G A T A T G C T A C G A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CCTACWGTCG--
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T A C G T G T A C A G T C C G A T G T C A A G T C C G A T A C T G C G A T A T G C T A C G A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CCTACWGTCG--
CNNNGCTACTGTANNN
 A C G T A C G T A C G T A C G T G T A C A G T C C G A T G T C A A G T C C G A T A C T G C G A T A T G C T A C G A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCTACWGTCG---
CGACCAACTGCCATGC
 A C G T A C G T A C G T G T A C A G T C C G A T G T C A A G T C C G A T A C T G C G A T A T G C T A C G A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCTACWGTCG
CCCCCTGCTGTG-
 A C G T A C G T A C G T G T A C A G T C C G A T G T C A A G T C C G A T A C T G C G A T A T G C T A C G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCTACWGTCG
CCAACTGCCA
 G T A C A G T C C G A T G T C A A G T C C G A T A C T G C G A T A T G C T A C G
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCTACWGTCG
---GCTGTG-
 G T A C A G T C C G A T G T C A A G T C C G A T A C T G C G A T A T G C T A C G
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCTACWGTCG
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C C G A T G T C A A G T C C G A T A C T G C G A T A T G C T A C G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0047.1_Myf6_1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTACWGTCG---
CNGACACCTGTTCNNN
 A C G T A C G T A C G T G T A C A G T C C G A T G T C A A G T C C G A T A C T G C G A T A T G C T A C G A C G T A C G T A C G T
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTACWGTCG--
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T G T A C A G T C C G A T G T C A A G T C C G A T A C T G C G A T A T G C T A C G A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G