Information for 11-GCCGTTGGGG (Motif 13)

A C T G A G T C A G T C A C T G A C G T A C G T A C T G C T A G A C T G A T C G
Reverse Opposite:
A T G C A G T C A G T C G T A C C G T A C G T A A G T C A C T G A C T G A G T C
p-value:1e-7
log p-value:-1.717e+01
Information Content per bp:1.922
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.3 +/- 18.6bp
Average Position of motif in Background65.2 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GCCGTTGGGG
TGGCAGTTGG--
 A C G T A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C T G C T A G A C T G A T C G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCCGTTGGGG
GGCVGTTR---
 A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C T G C T A G A C T G A T C G
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCCGTTGGGG
BRRCVGTTDN--
 A C G T A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C T G C T A G A C T G A T C G
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCCGTTGGGG-
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C T G C T A G A C T G A T C G A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GCCGTTGGGG--
NTGCCCTTGGGCGN
 A C G T A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C T G C T A G A C T G A T C G A C G T A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCGTTGGGG--
TGCCCTNAGGGCA
 A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C T G C T A G A C T G A T C G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCCGTTGGGG--
TGCCCTGAGGGCA
 A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C T G C T A G A C T G A T C G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCGTTGGGG-
TGCCCNGGGGCA
 A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C T G C T A G A C T G A T C G A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GCCGTTGGGG-
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C T G C T A G A C T G A T C G A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCGTTGGGG--
TGCCCTGAGGGCA
 A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C T G C T A G A C T G A T C G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A