Information for 3-WARRYAAACA (Motif 4)

C G A T C T G A C T G A C T G A G A C T G T C A T G C A C T G A A G T C C G T A
Reverse Opposite:
G C A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T G A C T G C T A
p-value:1e-24
log p-value:-5.742e+01
Information Content per bp:1.547
Number of Target Sequences with motif125.0
Percentage of Target Sequences with motif15.78%
Number of Background Sequences with motif2648.5
Percentage of Background Sequences with motif5.53%
Average Position of motif in Targets51.8 +/- 25.5bp
Average Position of motif in Background50.4 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:WARRYAAACA
-AAATAAACA
 C G A T C T G A C T G A C T G A G A C T G T C A T G C A C T G A A G T C C G T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:WARRYAAACA
WAAGTAAAYA
 C G A T C T G A C T G A C T G A G A C T G T C A T G C A C T G A A G T C C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.90
Offset:0
Orientation:forward strand
Alignment:WARRYAAACA
AAAGTAAACA
 C G A T C T G A C T G A C T G A G A C T G T C A T G C A C T G A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.90
Offset:0
Orientation:forward strand
Alignment:WARRYAAACA
AAAGTAAACA
 C G A T C T G A C T G A C T G A G A C T G T C A T G C A C T G A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXC2/MA0846.1/Jaspar

Match Rank:5
Score:0.89
Offset:0
Orientation:forward strand
Alignment:WARRYAAACA--
TAAGTAAACAAA
 C G A T C T G A C T G A C T G A G A C T G T C A T G C A C T G A A G T C C G T A A C G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:6
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-WARRYAAACA-
WWATRTAAACAN
 A C G T C G A T C T G A C T G A C T G A G A C T G T C A T G C A C T G A A G T C C G T A A C G T
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-WARRYAAACA----
CAAAGTAAACANNNN
 A C G T C G A T C T G A C T G A C T G A G A C T G T C A T G C A C T G A A G T C C G T A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXL1/MA0033.2/Jaspar

Match Rank:8
Score:0.87
Offset:3
Orientation:forward strand
Alignment:WARRYAAACA
---GTAAACA
 C G A T C T G A C T G A C T G A G A C T G T C A T G C A C T G A A G T C C G T A
A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A

FOXC1/MA0032.2/Jaspar

Match Rank:9
Score:0.86
Offset:0
Orientation:forward strand
Alignment:WARRYAAACA-
TATGTAAATAT
 C G A T C T G A C T G A C T G A G A C T G T C A T G C A C T G A A G T C C G T A A C G T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

FOXD2/MA0847.1/Jaspar

Match Rank:10
Score:0.86
Offset:3
Orientation:forward strand
Alignment:WARRYAAACA
---GTAAACA
 C G A T C T G A C T G A C T G A G A C T G T C A T G C A C T G A A G T C C G T A
A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A