Information for 13-GCCCCAGGGC (Motif 20)

C T A G A T G C A T G C A G T C A G T C G T C A A T C G A C T G A C T G A T G C
Reverse Opposite:
A T C G A G T C A G T C A T G C A C G T C T A G C T A G A T C G A T C G A G T C
p-value:1e-8
log p-value:-1.916e+01
Information Content per bp:1.894
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif336.3
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets53.1 +/- 30.2bp
Average Position of motif in Background49.7 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B/MA0811.1/Jaspar

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GCCCCAGGGC-
TGCCCCAGGGCA
 A C G T C T A G A T G C A T G C A G T C A G T C G T C A A T C G A C T G A C T G A T G C A C G T
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:2
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GCCCCAGGGC-
TGCCCCAGGGCA
 A C G T C T A G A T G C A T G C A G T C A G T C G T C A A T C G A C T G A C T G A T G C A C G T
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:3
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--GCCCCAGGGC--
TTGCCCTAGGGCAT
 A C G T A C G T C T A G A T G C A T G C A G T C A G T C G T C A A T C G A C T G A C T G A T G C A C G T A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-GCCCCAGGGC-
TGCCCCCGGGCA
 A C G T C T A G A T G C A T G C A G T C A G T C G T C A A T C G A C T G A C T G A T G C A C G T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:5
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--GCCCCAGGGC--
CCGCCCAAGGGCAG
 A C G T A C G T C T A G A T G C A T G C A G T C A G T C G T C A A T C G A C T G A C T G A T G C A C G T A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GCCCCAGGGC--
GCCTCAGGGCAT
 C T A G A T G C A T G C A G T C A G T C G T C A A T C G A C T G A C T G A T G C A C G T A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GCCCCAGGGC--
TCACCTCTGGGCAG
 A C G T A C G T C T A G A T G C A T G C A G T C A G T C G T C A A T C G A C T G A C T G A T G C A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GCCCCAGGGC--
SCCTSAGGSCAW
 C T A G A T G C A T G C A G T C A G T C G T C A A T C G A C T G A C T G A T G C A C G T A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GCCCCAGGGC-
GTCCCCAGGGGA
 A C G T C T A G A T G C A T G C A G T C A G T C G T C A A T C G A C T G A C T G A T G C A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GCCCCAGGGC--
NTCGCCTCAGGCAAT
 A C G T A C G T A C G T C T A G A T G C A T G C A G T C A G T C G T C A A T C G A C T G A C T G A T G C A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T