Information for 9-TGTAACAATC (Motif 40)

A G C T A C T G A G C T C G T A C G T A A G T C C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T A C T G A C G T A C G T C T G A A G T C C T G A
p-value:1e-7
log p-value:-1.669e+01
Information Content per bp:1.945
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.4 +/- 30.7bp
Average Position of motif in Background64.5 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:TGTAACAATC
--NAACAAT-
 A G C T A C T G A G C T C G T A C G T A A G T C C G T A C G T A A C G T A G T C
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:TGTAACAATC
---AACAAT-
 A G C T A C T G A G C T C G T A C G T A A G T C C G T A C G T A A C G T A G T C
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TGTAACAATC
GTAAACAAT-
 A G C T A C T G A G C T C G T A C G T A A G T C C G T A C G T A A C G T A G T C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TGTAACAATC
AATGTATCAAT-
 A C G T A C G T A G C T A C T G A G C T C G T A C G T A A G T C C G T A C G T A A C G T A G T C
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TGTAACAATC-----
AATGAACAATGGAATT
 A C G T A G C T A C T G A G C T C G T A C G T A A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGTAACAATC-----
TNCNNAACAATTTTTNC
 A C G T A C G T A G C T A C T G A G C T C G T A C G T A A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGTAACAATC-
-RNAACAATGG
 A G C T A C T G A G C T C G T A C G T A A G T C C G T A C G T A A C G T A G T C A C G T
A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TGTAACAATC---
NNTNANAACAATTNNA
 A C G T A C G T A C G T A G C T A C T G A G C T C G T A C G T A A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0072.1_Sox5_1/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGTAACAATC----
TTTAGAACAATAAAAT
 A C G T A C G T A G C T A C T G A G C T C G T A C G T A A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGTAACAATC-
--GAACAATGG
 A G C T A C T G A G C T C G T A C G T A A G T C C G T A C G T A A C G T A G T C A C G T
A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G