Information for 3-CCKCYAKSMACWGYTC (Motif 4)

A G T C A G T C A C G T A G T C A G C T C G T A A C G T A T C G G T A C C G T A A G T C C G T A A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A T C A G A G T C C G A T A C T G A C G T C A T G A T G C G T C A A C G T C T G A C T A G G T C A A C T G A C T G
p-value:1e-13
log p-value:-3.154e+01
Information Content per bp:1.830
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 23.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCKCYAKSMACWGYTC
---CCAGGAACAG---
 A G T C A G T C A C G T A G T C A G C T C G T A A C G T A T C G G T A C C G T A A G T C C G T A A C T G A G T C A C G T A G T C
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCKCYAKSMACWGYTC
TACCCACAATGCATTG---
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C A G C T C G T A A C G T A T C G G T A C C G T A A G T C C G T A A C T G A G T C A C G T A G T C
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:CCKCYAKSMACWGYTC
--------CACAGN--
 A G T C A G T C A C G T A G T C A G C T C G T A A C G T A T C G G T A C C G T A A G T C C G T A A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CCKCYAKSMACWGYTC
GTCCGCCATTA-------
 A C G T A C G T A G T C A G T C A C G T A G T C A G C T C G T A A C G T A T C G G T A C C G T A A G T C C G T A A C T G A G T C A C G T A G T C
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CCKCYAKSMACWGYTC
-SCCTAGCAACAG---
 A G T C A G T C A C G T A G T C A G C T C G T A A C G T A T C G G T A C C G T A A G T C C G T A A C T G A G T C A C G T A G T C
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:6
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CCKCYAKSMACWGYTC-
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C A G C T C G T A A C G T A T C G G T A C C G T A A G T C C G T A A C T G A G T C A C G T A G T C A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

PB0128.1_Gcm1_2/Jaspar

Match Rank:7
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----CCKCYAKSMACWGYTC
NTCNTCCCCTATNNGNN----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C A G C T C G T A A C G T A T C G G T A C C G T A A G T C C G T A A C T G A G T C A C G T A G T C
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.49
Offset:8
Orientation:forward strand
Alignment:CCKCYAKSMACWGYTC
--------AACAGCTG
 A G T C A G T C A C G T A G T C A G C T C G T A A C G T A T C G G T A C C G T A A G T C C G T A A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:9
Score:0.48
Offset:6
Orientation:forward strand
Alignment:CCKCYAKSMACWGYTC
------NHAACBGYYV
 A G T C A G T C A C G T A G T C A G C T C G T A A C G T A T C G G T A C C G T A A G T C C G T A A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CCKCYAKSMACWGYTC
-TCCAATCCACA----
 A G T C A G T C A C G T A G T C A G C T C G T A A C G T A T C G G T A C C G T A A G T C C G T A A C T G A G T C A C G T A G T C
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T