Information for 20-WGTGCMCMAGGGAAGS (Motif 38)

C G A T A C T G A C G T A T C G A G T C G T C A G T A C G T C A C T G A A C T G A C T G A C T G C G T A C G T A A C T G A T C G
Reverse Opposite:
A T G C A G T C A C G T A C G T A G T C A G T C A G T C A G C T A C G T A C T G A C G T A C T G A T G C G T C A A G T C G C T A
p-value:1e-8
log p-value:-1.982e+01
Information Content per bp:1.876
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.2 +/- 23.5bp
Average Position of motif in Background55.3 +/- 4.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:WGTGCMCMAGGGAAGS
-NGTCCCNNGGGA---
 C G A T A C T G A C G T A T C G A G T C G T C A G T A C G T C A C T G A A C T G A C T G A C T G C G T A C G T A A C T G A T C G
A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:WGTGCMCMAGGGAAGS
--TGCCCCAGGGCA--
 C G A T A C T G A C G T A T C G A G T C G T C A G T A C G T C A C T G A A C T G A C T G A C T G C G T A C G T A A C T G A T C G
A C G T A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:WGTGCMCMAGGGAAGS
ATTCCCTGAGGGGAA-
 C G A T A C T G A C G T A T C G A G T C G T C A G T A C G T C A C T G A A C T G A C T G A C T G C G T A C G T A A C T G A T C G
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:WGTGCMCMAGGGAAGS
--TGCCCTNGGGCA--
 C G A T A C T G A C G T A T C G A G T C G T C A G T A C G T C A C T G A A C T G A C T G A C T G C G T A C G T A A C T G A T C G
A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---WGTGCMCMAGGGAAGS
GGGTGTGCCCAAAAGG---
 A C G T A C G T A C G T C G A T A C T G A C G T A T C G A G T C G T C A G T A C G T C A C T G A A C T G A C T G A C T G C G T A C G T A A C T G A T C G
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:WGTGCMCMAGGGAAGS
-TTGCCCTAGGGCAT-
 C G A T A C T G A C G T A T C G A G T C G T C A G T A C G T C A C T G A A C T G A C T G A C T G C G T A C G T A A C T G A T C G
A C G T C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:WGTGCMCMAGGGAAGS
---GCCTCAGGGCAT-
 C G A T A C T G A C G T A T C G A G T C G T C A G T A C G T C A C T G A A C T G A C T G A C T G C G T A C G T A A C T G A T C G
A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:WGTGCMCMAGGGAAGS
-ATTCCCAAGGGAAT-
 C G A T A C T G A C G T A T C G A G T C G T C A G T A C G T C A C T G A A C T G A C T G A C T G C G T A C G T A A C T G A T C G
A C G T C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:WGTGCMCMAGGGAAGS
ATTGCCTGAGGCGAA-
 C G A T A C T G A C G T A T C G A G T C G T C A G T A C G T C A C T G A A C T G A C T G A C T G C G T A C G T A A C T G A T C G
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:WGTGCMCMAGGGAAGS
-GTCCCCAGGGGA---
 C G A T A C T G A C G T A T C G A G T C G T C A G T A C G T C A C T G A A C T G A C T G A C T G C G T A C G T A A C T G A T C G
A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T