Information for 11-GGSAGKGAGGCAC (Motif 31)

A C T G C T A G T A C G C G T A A C T G C A T G T A C G C G T A A C T G A T C G T G A C G T C A G T A C
Reverse Opposite:
C A T G A C G T A C T G T A G C G T A C A C G T A T G C G T A C A G T C A C G T A T G C A G T C A G T C
p-value:1e-9
log p-value:-2.096e+01
Information Content per bp:1.757
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.97%
Number of Background Sequences with motif245.2
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets45.5 +/- 22.9bp
Average Position of motif in Background47.4 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGSAGKGAGGCAC
GGGCGGGAAGG--
 A C T G C T A G T A C G C G T A A C T G C A T G T A C G C G T A A C T G A T C G T G A C G T C A G T A C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGSAGKGAGGCAC
CGGAAGTGAAAC--
 A C G T A C T G C T A G T A C G C G T A A C T G C A T G T A C G C G T A A C T G A T C G T G A C G T C A G T A C
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGSAGKGAGGCAC-
----GGGAGGACNG
 A C T G C T A G T A C G C G T A A C T G C A T G T A C G C G T A A C T G A T C G T G A C G T C A G T A C A C G T
A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGSAGKGAGGCAC
CTGGCAGNCTGCCA-
 A C G T A C G T A C T G C T A G T A C G C G T A A C T G C A T G T A C G C G T A A C T G A T C G T G A C G T C A G T A C
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGSAGKGAGGCAC-----
GGAAGGAAGGAAGGAAGG
 A C T G C T A G T A C G C G T A A C T G C A T G T A C G C G T A A C T G A T C G T G A C G T C A G T A C A C G T A C G T A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGSAGKGAGGCAC
GGGCGGGAAGG--
 A C T G C T A G T A C G C G T A A C T G C A T G T A C G C G T A A C T G A T C G T G A C G T C A G T A C
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGSAGKGAGGCAC---
-SCAGYCADGCATGAC
 A C T G C T A G T A C G C G T A A C T G C A T G T A C G C G T A A C T G A T C G T G A C G T C A G T A C A C G T A C G T A C G T
A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGSAGKGAGGCAC
AGAGGAAGTG------
 A C G T A C G T A C G T A C T G C T A G T A C G C G T A A C T G C A T G T A C G C G T A A C T G A T C G T G A C G T C A G T A C
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGSAGKGAGGCAC
GGGCGGGACC---
 A C T G C T A G T A C G C G T A A C T G C A T G T A C G C G T A A C T G A T C G T G A C G T C A G T A C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGSAGKGAGGCAC---
NGTAGGTTGGCATNNN
 A C T G C T A G T A C G C G T A A C T G C A T G T A C G C G T A A C T G A T C G T G A C G T C A G T A C A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T