Information for 7-ARKHAAGSBT (Motif 29)

T G C A C T A G A C G T G A T C T G C A G T C A C T A G A T G C A T G C C A G T
Reverse Opposite:
G T C A T A C G A T C G G A T C A C G T A C G T C T A G T G C A A G T C A C G T
p-value:1e-9
log p-value:-2.140e+01
Information Content per bp:1.540
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif5.38%
Number of Background Sequences with motif744.5
Percentage of Background Sequences with motif1.65%
Average Position of motif in Targets42.7 +/- 26.8bp
Average Position of motif in Background51.1 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:ARKHAAGSBT
---CAAGCTT
 T G C A C T A G A C G T G A T C T G C A G T C A C T A G A T G C A T G C C A G T
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

MYBL1/MA0776.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ARKHAAGSBT
ACCGTTAACGGT
 A C G T A C G T T G C A C T A G A C G T G A T C T G C A G T C A C T A G A T G C A T G C C A G T
C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ARKHAAGSBT
NGYCATAAAWCH-
 A C G T A C G T A C G T T G C A C T A G A C G T G A T C T G C A G T C A C T A G A T G C A T G C C A G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ARKHAAGSBT
AAGGCAAGTGT
 A C G T T G C A C T A G A C G T G A T C T G C A G T C A C T A G A T G C A T G C C A G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ARKHAAGSBT--
ANGNAAAGGTCA
 T G C A C T A G A C G T G A T C T G C A G T C A C T A G A T G C A T G C C A G T A C G T A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ARKHAAGSBT
-ATTAAA---
 T G C A C T A G A C G T G A T C T G C A G T C A C T A G A T G C A T G C C A G T
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ARKHAAGSBT
AAAAGTCAA----
 A C G T A C G T A C G T T G C A C T A G A C G T G A T C T G C A G T C A C T A G A T G C A T G C C A G T
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ARKHAAGSBT
NGCAATTAAA---
 A C G T A C G T A C G T T G C A C T A G A C G T G A T C T G C A G T C A C T A G A T G C A T G C C A G T
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ARKHAAGSBT
NCYAATAAAA---
 A C G T A C G T A C G T T G C A C T A G A C G T G A T C T G C A G T C A C T A G A T G C A T G C C A G T
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ARKHAAGSBT---
AANTCATGCGTGAA
 A C G T T G C A C T A G A C G T G A T C T G C A G T C A C T A G A T G C A T G C C A G T A C G T A C G T A C G T
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A